RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PRELID2Q8N945 189 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 MCUQ8NE86 351 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 OR2A1Q8NGT9 310 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 MVB12AQ96EY5 273 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 PBKQ96KB5 322 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 SPSB2Q99619 263 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 MIPEPQ99797 713 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 ZFYVE21Q9BQ24 234 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 ILKAPQ9H0C8 392 aaPredicted RBP12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CCDC68Q9H2F9 335 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 CIDEBQ9UHD4 219 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 NFS1Q9Y697 457 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 COMMD10Q9Y6G5 202 aa12.43□□□□□ -0.42
RPAIN-202ENST00000381208 SNRNP200O75643 2136 aaKnown RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 TNRC6AQ8NDV7 1962 aaKnown RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 SPENQ96T58 3664 aaKnown RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 HYKKA2RU49 373 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 BLACEA4D250 179 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 OR2A25A4D2G3 310 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 VSTM2BA6NLU5 285 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 MYO1CO00159 1063 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 TXNDC9O14530 226 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 NIPSNAP2O75323 286 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 ENO3P13929 434 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 ITGA3P26006 1051 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 VSX2P58304 361 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 RAPSNQ13702 412 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 TUBB8Q3ZCM7 444 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 AGAP7PQ5VUJ5 663 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 PRAMEF13Q5VWM6 474 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 Q6ZS92 163 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 FBXO15Q8NCQ5 510 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 SSC4DQ8WTU2 575 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 AGAP4Q96P64 663 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 ZNF304Q9HCX3 659 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 MAP10Q9P2G4 905 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 ZNF282Q9UDV7 671 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-202ENST00000381208 FBXL4Q9UKA2 621 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 CRYL1Q9Y2S2 319 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 JRKLQ9Y4A0 524 aa12.42□□□□□ -0.42
RPAIN-202ENST00000381208 PRRC2CQ9Y520 2896 aaKnown RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 ICE1Q9Y2F5 2266 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 A0A1W2PPV9 198 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 CTAGE9A4FU28 777 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 EIF3FO00303 357 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 CTSVO60911 334 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 USP1O94782 785 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 KRT14P02533 472 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 RPA3P35244 121 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 ABATP80404 500 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 DHX34Q14147 1143 aaKnown RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 RBBP7Q16576 425 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 KLHL38Q2WGJ6 581 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 GARNL3Q5VVW2 1013 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 COX15Q7KZN9 410 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 RASGEF1CQ8N431 466 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 PPP4R1Q8TF05 950 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 KCNJ9Q92806 393 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 MAGOHBQ96A72 148 aaKnown RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 EBNA1BP2Q99848 306 aaKnown RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 WDR77Q9BQA1 342 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 DPH7Q9BTV6 452 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 LHPPQ9H008 270 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 EPS8L2Q9H6S3 715 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 SLC6A20Q9NP91 592 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 MRPS30Q9NP92 439 aaKnown RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 AGPAT4Q9NRZ5 378 aa12.41□□□□□ -0.42
RPAIN-202ENST00000381208 ZC3H7BQ9UGR2 993 aaKnown RBP12.41□□□□□ -0.42
RPAIN-202ENST00000381208 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 NOTCH2Q04721 2471 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 A0A0J9YVX5 310 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 TCRBV7S3A2A0A539 114 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 ARHGEF33A8MVX0 844 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 TCP11X1B4DZS4 312 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 GOLGA8KD6RF30 607 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 GOLGA8TH3BQL2 631 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 SOCS6O14544 535 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 FDXRP22570 491 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 MCM3P25205 808 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 CXCR5P32302 372 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 VPS41P49754 854 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 AP2B1P63010 937 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 PRDX1Q06830 199 aaKnown RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 ELOAQ14241 798 aaKnown RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 TRIP13Q15645 432 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 PLEKHN1Q494U1 663 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-202ENST00000381208 CCSMST1Q4G0I0 132 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 ZNF470Q6ECI4 717 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 LRRC8EQ6NSJ5 796 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 KIRREL2Q6UWL6 708 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 IGFL2Q6UWQ7 119 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 CENPUQ71F23 418 aa12.4□□□□□ -0.42
RPAIN-202ENST00000381208 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms