RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 FAM171A1Q5VUB5 890 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 GDPGP1Q6ZNW5 385 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 TMEM132CQ8N3T6 1108 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 SPATA17Q96L03 361 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 EPYCQ99645 322 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 KCNS3Q9BQ31 491 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 NARFLQ9H6Q4 476 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 REEP1Q9H902 201 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 TRMT6Q9UJA5 497 aaKnown RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 MED16Q9Y2X0 877 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 MCM3APO60318 1980 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 B4DXG7 233 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 C9P02748 559 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 ATXN1LP0C7T5 689 aaKnown RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 HOXA11P31270 313 aaPredicted RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 HTR6P50406 440 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 IKZF1Q13422 519 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 PCBP2Q15366 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 BAK1Q16611 211 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 FBXO48Q5FWF7 155 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 SLC35F1Q5T1Q4 408 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 PHACTR4Q8IZ21 702 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 STX19Q8N4C7 294 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 FBXL6Q8N531 539 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 RTL3Q8N8U3 475 aaKnown RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 OR52B6Q8NGF0 335 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 EDEM1Q92611 657 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 FAM83DQ9H4H8 585 aa13.32□□□□□ -0.28
KIF3A-201ENST00000378735 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 TNPO3Q9Y5L0 923 aaKnown RBP13.32□□□□□ -0.28
KIF3A-201ENST00000378735 A0A1W2PQ09 198 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SOCS7O14512 581 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 BET1O15155 118 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PDE9AO76083 593 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PTHP01270 115 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 ETV3P41162 512 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 CSTF3Q12996 717 aaKnown RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 ZNF79Q15937 498 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SPANXN4Q5MJ08 99 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 CACHD1Q5VU97 1274 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 LRRC66Q68CR7 880 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 GPRIN1Q7Z2K8 1008 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 ATCAYQ86WG3 371 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 REPS1Q96D71 796 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 OR52E6Q96RD3 313 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 CDCA4Q9BXL8 241 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SIK2Q9H0K1 926 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 NUDT4Q9NZJ9 180 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 KCTD3Q9Y597 815 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 GLTPD2A6NH11 291 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 ARVCFO00192 962 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PDHXO00330 501 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 RGS14O43566 566 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 RECQL4O94761 1208 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SLC2A4P14672 509 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 KCNE1P15382 129 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 CHMP24386 653 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 LILRA4P59901 499 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 CD83Q01151 205 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 DEPDC4Q8N2C3 294 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 NUDT8Q8WV74 236 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 MMP28Q9H239 520 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 THUMPD1Q9NXG2 353 aaKnown RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 CD274Q9NZQ7 290 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PTCH2Q9Y6C5 1203 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PCM1Q15154 2024 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SMIM28A0A1B0GU29 152 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 NCF1BA6NI72 391 aaPredicted RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 NCF1CA8MVU1 366 aaPredicted RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 TFECO14948 347 aaPredicted RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 MYCLP1P12525 358 aaPredicted RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 HOXB9P17482 250 aaPredicted RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 NRG1Q02297 640 aaPredicted RBP13.31□□□□□ -0.28
KIF3A-201ENST00000378735 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 ERICH5Q6P6B1 374 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SERPINA11Q86U17 422 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 PGBD5Q8N414 524 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 YIPF7Q8N8F6 280 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 GDPD1Q8N9F7 314 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 NT5MQ9NPB1 228 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 STOML2Q9UJZ1 356 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 SNX8Q9Y5X2 465 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 AUP1Q9Y679 476 aa13.31□□□□□ -0.28
KIF3A-201ENST00000378735 LINC00862A6NCI5 91 aa13.3□□□□□ -0.28
KIF3A-201ENST00000378735 HHLA1C9JL84 531 aa13.3□□□□□ -0.28
KIF3A-201ENST00000378735 SLC28A1O00337 649 aa13.3□□□□□ -0.28
KIF3A-201ENST00000378735 MTRF1O75570 445 aaKnown RBP13.3□□□□□ -0.28
KIF3A-201ENST00000378735 ZNF682O95780 498 aa13.3□□□□□ -0.28
KIF3A-201ENST00000378735 OTCP00480 354 aa13.3□□□□□ -0.28
KIF3A-201ENST00000378735 CNPP09543 421 aaKnown RBP13.3□□□□□ -0.28
KIF3A-201ENST00000378735 PCSK2P16519 638 aa13.3□□□□□ -0.28
KIF3A-201ENST00000378735 ALDH9A1P49189 494 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms