RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 UBXN2BQ14CS0 331 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 ZNF678Q5SXM1 525 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 THOC7Q6I9Y2 204 aaKnown RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MRGPRX2Q96LB1 330 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 EEFSECP57772 596 aaKnown RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 RAB30Q15771 203 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MINDY4Q4G0A6 757 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 ZDHHC21Q8IVQ6 265 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 SVOPLQ8N434 492 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 ZCCHC10Q8TBK6 192 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 DIRAS2Q96HU8 199 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 CCM2Q9BSQ5 444 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MRM3Q9HC36 420 aaKnown RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 VPS29Q9UBQ0 182 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 N4BP2Q86UW6 1770 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 TNFRSF11BO00300 401 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MPZL2O60487 215 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 POP7O75817 140 aaKnown RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 OAZ2O95190 189 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 RGS8P57771 180 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-201ENST00000378156 TAF13Q15543 124 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 ZBTB6Q15916 424 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 LCN1P1Q5VSP4 162 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 AHSA2Q719I0 299 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 IRF7Q92985 503 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MNTQ99583 582 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 GSDMCQ9BYG8 508 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 MCUBQ9NWR8 336 aa14.66□□□□□ -0.06
NPHP4-201ENST00000378156 TEAD4Q15561 434 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 UTS2BQ765I0 119 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ERI1Q8IV48 349 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 UTP4Q969X6 686 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 OTUB2Q96DC9 234 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 SLC38A3Q99624 504 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 CGREF1Q99674 301 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 MED28Q9H204 178 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 TTYH1Q9H313 450 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 KAT8Q9H7Z6 458 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 CD320Q9NPF0 282 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 B4GALT6Q9UBX8 382 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 LRRC14BA6NHZ5 514 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 RHPN2P1A8MT19 583 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ATF6P18850 670 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 PRPS1L1P21108 318 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 CREB5Q02930 508 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ENPP7Q6UWV6 458 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 FAM43BQ6ZT52 329 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 LRRTM4Q86VH4 590 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DNAJB8Q8NHS0 232 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 KIAA1191Q96A73 305 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 TAMM41Q96BW9 452 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 SLC22A14Q9Y267 594 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 RBMX2Q9Y388 322 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ZNF840PA6NDX5 716 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 AIREO43918 545 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 LINGO3P0C6S8 592 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 GDF5P43026 501 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DIO3P55073 304 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DNAJB13P59910 316 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 SCAPQ12770 1279 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 CEACAM7Q14002 265 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 SLBPQ14493 270 aaKnown RBP eCLIP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 RTP2Q5QGT7 225 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 FRG2Q64ET8 278 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 TMPRSS11AQ6ZMR5 421 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 HMGB4Q8WW32 186 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 FCGR1BQ92637 280 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DNASE1L2Q92874 299 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 IGSF8Q969P0 613 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 TOP1MTQ969P6 601 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 IMP4Q96G21 291 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 FRG2BQ96QU4 278 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 FEM1AQ9BSK4 669 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DERL2Q9GZP9 239 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 MRPS30Q9NP92 439 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 WDR37Q9Y2I8 494 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 LRP5O75197 1615 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 TEX28O15482 410 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 PCDH7O60245 1069 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ERN1O75460 977 aaKnown RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 CBSLP0DN79 551 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 MAGP20916 626 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 CBSP35520 551 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ZNF730Q6ZMV8 503 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 SAMD14Q8IZD0 417 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 SCAIQ8N9R8 606 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 OR8H1Q8NGG4 311 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 ZBED6CLQ96FA7 236 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DHRS4Q9BTZ2 278 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 TMEM27Q9HBJ8 222 aa14.65□□□□□ -0.06
NPHP4-201ENST00000378156 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
NPHP4-201ENST00000378156 A0A1B0GUL6 1792 aa14.64□□□□□ -0.07
NPHP4-201ENST00000378156 STX16O14662 325 aa14.64□□□□□ -0.07
NPHP4-201ENST00000378156 MMP20O60882 483 aa14.64□□□□□ -0.07
NPHP4-201ENST00000378156 TECRLQ5HYJ1 363 aa14.64□□□□□ -0.07
NPHP4-201ENST00000378156 TRPV3Q8NET8 790 aa14.64□□□□□ -0.07
NPHP4-201ENST00000378156 FBXL12Q9NXK8 326 aa14.64□□□□□ -0.07
NPHP4-201ENST00000378156 DNAJB9Q9UBS3 223 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms