RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ARL15Q9NXU5 204 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 TMPRSS11EQ9UL52 423 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 NDRG4Q9ULP0 352 aaKnown RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ABCG2Q9UNQ0 655 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ERVK-11Q9UQG0 969 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 SH3GLB1Q9Y371 365 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 SNX5Q9Y5X3 404 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 CFAP99D6REC4 459 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 MITFO75030 526 aaPredicted RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 IGSF6O95976 241 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 IGFBP5P24593 272 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 HOXA9P31269 272 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 CA8P35219 290 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ALDH7A1P49419 539 aaKnown RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 TPD52P55327 224 aaPredicted RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 NR1D2Q14995 579 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 DUOXA1Q1HG43 343 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ATP13A5Q4VNC0 1218 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 NIPAL1Q6NVV3 410 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 C16orf87Q6PH81 154 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 DOK6Q6PKX4 331 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 UBE2R2Q712K3 238 aaPredicted RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 OR2AP1Q8NGE2 309 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 OR8J2Q8NGG1 315 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 FIBINQ8TAL6 211 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 CNIH3Q8TBE1 160 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 SNRNP27Q8WVK2 155 aaKnown RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 CCDC138Q96M89 665 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 CHST8Q9H2A9 424 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ZNF334Q9HCZ1 680 aaPredicted RBP10.37□□□□□ -0.75
ABCF1-202ENST00000376545 AASDHPPTQ9NRN7 309 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 SRRDQ9UH36 339 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 PCDHGA10Q9Y5H3 936 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 ORC6Q9Y5N6 252 aa10.37□□□□□ -0.75
ABCF1-202ENST00000376545 J3QRK9 145 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 UGDHO60701 494 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 XYLBO75191 536 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 E2F6O75461 281 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ANGPTL1O95841 491 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 SOD2P04179 222 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 GSNP06396 782 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 OCM2P0CE71 109 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 OCMP0CE72 109 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PRPS1L1P21108 318 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 SERPINA4P29622 427 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 DNAJA1P31689 397 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 IDUAP35475 653 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 OPRL1P41146 370 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 NEK2P51955 445 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PCDH1Q08174 1060 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 LMAN2Q12907 356 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 RAB33AQ14088 237 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 NEK10Q6ZWH5 1172 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 HTR3DQ70Z44 454 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CBLL1Q75N03 491 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PTOV1Q86YD1 416 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CSGALNACT1Q8TDX6 532 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FBXL8Q96CD0 374 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 EGLN2Q96KS0 407 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 MBD1Q9UIS9 605 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CLEC4EQ9ULY5 219 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 RFXANKO14593 260 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 SLC22A1O15245 554 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 C1QCP02747 245 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CXCL10P02778 98 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FPR1P21462 350 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 BCAP31P51572 246 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 RELAQ04206 551 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 SRSF11Q05519 484 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 UGT8Q16880 541 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 VMACQ2NL98 169 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PLEKHS1Q5SXH7 462 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ZDHHC20Q5W0Z9 365 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 LRRC66Q68CR7 880 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 NOXRED1Q6NXP6 359 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FAHD1Q6P587 224 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ERICH5Q6P6B1 374 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ANKRD46Q86W74 232 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 KLHDC8AQ8IYD2 350 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 NELL1Q92832 810 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 TSSK3Q96PN8 268 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ZNF300Q96RE9 604 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 COPS8Q99627 209 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PITX2Q99697 317 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FAM83CQ9BQN1 747 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 BTBD2Q9BX70 525 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 DGCR6LQ9BY27 220 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CPEB1Q9BZB8 566 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ELOVL6Q9H5J4 265 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FBXO8Q9NRD0 319 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 AP1M2Q9Y6Q5 423 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 U3KQV3 271 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 HELZP42694 1942 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 XPNPEP2O43895 674 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 JUPP14923 745 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 LHCGRP22888 699 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PFN3P60673 137 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CSTF3Q12996 717 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ZNF846Q147U1 533 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms