RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SERTAD3Q9UJW9 196 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 POMT2Q9UKY4 750 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 VPS9D1Q9Y2B5 631 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 MED16Q9Y2X0 877 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 HEBP2Q9Y5Z4 205 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 PSAT1Q9Y617 370 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 ANKRD12Q6UB98 2062 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 A6NL46 340 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 NIPSNAP2O75323 286 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 FTH1P02794 183 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 ESR1P03372 595 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 CD63P08962 238 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 GSTM1P09488 218 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 CYP2A7P20853 494 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 AGXTP21549 392 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 CDH3P22223 829 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 GSTM4Q03013 218 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 ATP1A4Q13733 1029 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 SSPNQ14714 243 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 MYBPC3Q14896 1274 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 KBTBD12Q3ZCT8 623 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 RBM20Q5T481 1227 aaKnown RBP11.72□□□□□ -0.53
LSM2-208ENST00000375661 C1QL3Q5VWW1 255 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 PTRHD1Q6GMV3 140 aaKnown RBP11.72□□□□□ -0.53
LSM2-208ENST00000375661 WDR93Q6P2C0 686 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 ACVR1CQ8NER5 493 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 HM13Q8TCT9 377 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 TM9SF4Q92544 642 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 ELMO1Q92556 727 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 MCMBPQ9BTE3 642 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 AARSD1Q9BTE6 412 aaKnown RBP11.72□□□□□ -0.53
LSM2-208ENST00000375661 SLC7A5P2Q9GIP4 190 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 WWP1Q9H0M0 922 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 EPB41L4BQ9H329 900 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 GALPQ9UBC7 116 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 FAM8A1Q9UBU6 413 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 GNPTGQ9UJJ9 305 aa11.72□□□□□ -0.53
LSM2-208ENST00000375661 CFAP20Q9Y6A4 193 aaKnown RBP11.72□□□□□ -0.53
LSM2-208ENST00000375661 SLC5A10A0PJK1 596 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 SLC9B1P1A6NJY1 282 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 TMEM150CB9EJG8 249 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 GPC4O75487 556 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 ACSL3O95573 720 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 SLC35G4P0C7Q5 338 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 POLR2CP19387 275 aaPredicted RBP11.71□□□□□ -0.53
LSM2-208ENST00000375661 ELAVL4P26378 380 aaKnown RBP11.71□□□□□ -0.53
LSM2-208ENST00000375661 AOAHP28039 575 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 PDHA2P29803 388 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 STX2P32856 288 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 PREPP48147 710 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 CD151P48509 253 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 PER3P56645 1201 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 SOX8P57073 446 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 TIAL1Q01085 375 aaKnown RBP eCLIP11.71□□□□□ -0.53
LSM2-208ENST00000375661 EFTUD2Q15029 972 aaKnown RBP eCLIP11.71□□□□□ -0.539e-8■■■■■ 52.3
LSM2-208ENST00000375661 CRB2Q5IJ48 1285 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 PRAMEF17Q5VTA0 474 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 ZNF385CQ66K41 422 aaPredicted RBP11.71□□□□□ -0.53
LSM2-208ENST00000375661 STRA8Q7Z7C7 330 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 SLC26A11Q86WA9 606 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 CISD2Q8N5K1 135 aaKnown RBP11.71□□□□□ -0.53
LSM2-208ENST00000375661 CLEC1AQ8NC01 280 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 OR1L3Q8NH93 324 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 GABPB2Q8TAK5 448 aaPredicted RBP11.71□□□□□ -0.53
LSM2-208ENST00000375661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.71□□□□□ -0.53
LSM2-208ENST00000375661 CDKL2Q92772 493 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 NDNQ99608 321 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 SLC30A3Q99726 388 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 PARD6BQ9BYG5 372 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 PITPNM3Q9BZ71 974 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.53
LSM2-208ENST00000375661 OR52A5Q9H2C5 316 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 AGPAT4Q9NRZ5 378 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 CDYLQ9Y232 598 aa11.71□□□□□ -0.53
LSM2-208ENST00000375661 CRYBG3Q68DQ2 2970 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 CELSR2Q9HCU4 2923 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 E7EQ34 232 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 F8W8V4 182 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 H3BMM5 538 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 PEX12O00623 359 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 LIN7AO14910 233 aaPredicted RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 CHRM3P20309 590 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 PRDX3P30048 256 aaKnown RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 PHBP35232 272 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 CLCN7P51798 805 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 KRT33BQ14525 404 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 BRD3Q15059 726 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 DCAF10Q5QP82 559 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 DUS1LQ6P1R4 473 aaKnown RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 MRGPREQ86SM8 312 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 ZC3HC1Q86WB0 502 aaKnown RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 VRK3Q8IV63 474 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 CTAGE3PQ8IX95 158 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 ZADH2Q8N4Q0 377 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 PPM1NQ8N819 430 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 ST6GALNAC3Q8NDV1 305 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms