RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 MCATQ8IVS2 390 aaKnown RBP16.56■□□□□ 0.24
H2AFX-201ENST00000375167 BEST3Q8N1M1 668 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 PHC3Q8NDX5 983 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 RAPGEF5Q92565 580 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 FAF2Q96CS3 445 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 LINC00615Q96LM1 132 aaPredicted RBP16.56■□□□□ 0.24
H2AFX-201ENST00000375167 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 SIGLEC12Q96PQ1 595 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 LACRTQ9GZZ8 138 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 ZNF304Q9HCX3 659 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 HYOU1Q9Y4L1 999 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 SPO11Q9Y5K1 396 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 DUSP10Q9Y6W6 482 aa16.56■□□□□ 0.24
H2AFX-201ENST00000375167 A6NNC1 897 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 H7C1Q1 480 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 ARHGEF9O43307 516 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 CHRM5P08912 532 aaPredicted RBP16.55■□□□□ 0.24
H2AFX-201ENST00000375167 EMP2P54851 167 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 DLX5P56178 289 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 TUBA3CQ13748 450 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 OR1C1Q15619 314 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 TCTE1Q5JU00 501 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 C11orf63Q6NUN7 778 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 TUBA3EQ6PEY2 450 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 ARHGEF18Q6ZSZ5 1173 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 ACAD11Q709F0 780 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 PAQR7Q86WK9 346 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 VSIG1Q86XK7 387 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 UTP23Q9BRU9 249 aaKnown RBP16.55■□□□□ 0.24
H2AFX-201ENST00000375167 DMRT3Q9NQL9 472 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 SMOXQ9NWM0 555 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 DDX56Q9NY93 547 aaKnown RBP16.55■□□□□ 0.24
H2AFX-201ENST00000375167 SPHK1Q9NYA1 384 aa16.55■□□□□ 0.24
H2AFX-201ENST00000375167 LRRD1A4D1F6 860 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 A8MUI8 341 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 ZNF487B1APH4 448 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 WIPF1O43516 503 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 MCM3P25205 808 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 PTGER1P34995 402 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 KIF5AQ12840 1032 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 BOP1Q14137 746 aaKnown RBP16.54■□□□□ 0.24
H2AFX-201ENST00000375167 PCBP2Q15366 365 aaKnown RBP eCLIP16.54■□□□□ 0.241e-19■■■■■ 27
H2AFX-201ENST00000375167 FAM214AQ32MH5 1076 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 FBXW10Q5XX13 1052 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 UNC5AQ6ZN44 842 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 C16orf47Q6ZP98 133 aaPredicted RBP16.54■□□□□ 0.24
H2AFX-201ENST00000375167 GALNTL5Q7Z4T8 443 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.54■□□□□ 0.24
H2AFX-201ENST00000375167 FLVCR1-AS1Q8TAF5 88 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 NAT14Q8WUY8 206 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 TMEM158Q8WZ71 300 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 ZNF354BQ96LW1 612 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 GOLPH3Q9H4A6 298 aa16.54■□□□□ 0.24
H2AFX-201ENST00000375167 BEX4Q9NWD9 120 aaPredicted RBP16.54■□□□□ 0.24
H2AFX-201ENST00000375167 C3orf70A6NLC5 250 aaPredicted RBP16.53■□□□□ 0.24
H2AFX-201ENST00000375167 PSTPIP1O43586 416 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 TNNT1P13805 278 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 MAGP20916 626 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 CD151P48509 253 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 NAP1L1P55209 391 aaKnown RBP16.53■□□□□ 0.24
H2AFX-201ENST00000375167 DCAF7P61962 342 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 PMPCAQ10713 525 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 PAFAH1B3Q15102 231 aaKnown RBP16.53■□□□□ 0.24
H2AFX-201ENST00000375167 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 ACER2Q5QJU3 275 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 ZNF449Q6P9G9 518 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 LRRC8AQ8IWT6 810 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 CIARTQ8N365 385 aaPredicted RBP16.53■□□□□ 0.24
H2AFX-201ENST00000375167 PQLC3Q8N755 202 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 HORMAD2Q8N7B1 307 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 ARMC2Q8NEN0 867 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 RNF157Q96PX1 679 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 SARGQ9BW04 601 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 SLC6A16Q9GZN6 736 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 ZNF700Q9H0M5 742 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 OR52A5Q9H2C5 316 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 ANKRD10Q9NXR5 420 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 OR6C2Q9NZP2 312 aa16.53■□□□□ 0.24
H2AFX-201ENST00000375167 A0A1B0GTH9 108 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 ISM1B1AKI9 464 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 SMAD7O15105 426 aaKnown RBP16.52■□□□□ 0.24
H2AFX-201ENST00000375167 NDST3O95803 873 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 F12P00748 615 aaPredicted RBP16.52■□□□□ 0.24
H2AFX-201ENST00000375167 KRT1P04264 644 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 PEX19P40855 299 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 ZC3H12BQ5HYM0 836 aaKnown RBP16.52■□□□□ 0.24
H2AFX-201ENST00000375167 NCBP2-AS2Q69YL0 99 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 PRMT9Q6P2P2 845 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 DTWD1Q8N5C7 304 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 TFGQ92734 400 aaPredicted RBP16.52■□□□□ 0.24
H2AFX-201ENST00000375167 TUBB6Q9BUF5 446 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 TRABDQ9H4I3 376 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 COG4Q9H9E3 785 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 CRIM1Q9NZV1 1036 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 TRPS1Q9UHF7 1281 aa16.52■□□□□ 0.24
H2AFX-201ENST00000375167 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
H2AFX-201ENST00000375167 SCN2AQ99250 2005 aa16.52■□□□□ 0.23
H2AFX-201ENST00000375167 SUN1O94901 812 aa16.51■□□□□ 0.23
H2AFX-201ENST00000375167 MX2P20592 715 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms