RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 C2orf69Q8N8R5 385 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 ATG16L2Q8NAA4 619 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 GGHQ92820 318 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 TBATAQ96M53 351 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 FYTTD1Q96QD9 318 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 PARK7Q99497 189 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 EPYCQ99645 322 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 MOSPD1Q9UJG1 213 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 PTCH2Q9Y6C5 1203 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 NYNRINQ9P2P1 1898 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 NT5C1B-RDH14C9J2C7 533 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 hCG_2039718K7EN88 272 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 BET1O15155 118 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 DNTTP04053 509 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 KCNE1P15382 129 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 NAGAP17050 411 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 ITGB6P18564 788 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 CPN2P22792 545 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 MYL9P24844 172 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 SLC19A1P41440 591 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 AGTR2P50052 363 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.327e-8■□□□□ 9.2
SNX12-202ENST00000374274 RFTN2Q52LD8 501 aaPredicted RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 SETMARQ53H47 684 aaPredicted RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 XKR4Q5GH76 650 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 C10orf62Q5T681 223 aaPredicted RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 TMPRSS11AQ6ZMR5 421 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 DPY19L3Q6ZPD9 716 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 RTL3Q8N8U3 475 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 DENND6BQ8NEG7 585 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 OR4L1Q8NH43 312 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 ASB15Q8WXK1 588 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 RNF34Q969K3 372 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 DPY30Q9C005 99 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 REEP1Q9H902 201 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 NUDT4Q9NZJ9 180 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 NUFIP1Q9UHK0 495 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 IKZF3Q9UKT9 509 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 SAMHD1Q9Y3Z3 626 aaKnown RBP13.06□□□□□ -0.32
SNX12-202ENST00000374274 CCL27Q9Y4X3 112 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 AP1M2Q9Y6Q5 423 aa13.06□□□□□ -0.32
SNX12-202ENST00000374274 GBF1Q92538 1859 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 CDC7O00311 574 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 RGS14O43566 566 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CPNE3O75131 537 aaKnown RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 PDE9AO76083 593 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 C9P02748 559 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CAPN1P07384 714 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 MMP2P08253 660 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 USP17L7P0C7H9 530 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 ATXN1LP0C7T5 689 aaKnown RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 ZNF30P17039 623 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CD86P42081 329 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 ALDH9A1P49189 494 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CSTF3Q12996 717 aaKnown RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CACHD1Q5VU97 1274 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 LRRC66Q68CR7 880 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 ERICH5Q6P6B1 374 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 UTS2BQ765I0 119 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 HDDC2Q7Z4H3 204 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 DEPDC4Q8N2C3 294 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 TOR1AIP2Q8NFQ8 470 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 SMOQ99835 787 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 C16orf70Q9BSU1 422 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CDCA4Q9BXL8 241 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 RACGAP1Q9H0H5 632 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 RNF121Q9H920 327 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 EIF2B4Q9UI10 523 aaKnown RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 TRMT6Q9UJA5 497 aaKnown RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 STOML2Q9UJZ1 356 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 MED16Q9Y2X0 877 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 AUP1Q9Y679 476 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 NPEPPSL1A6NEC2 478 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 MYO1GB0I1T2 1018 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 BTN3A1O00481 513 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 CELF2O95319 508 aaKnown RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 FGF1P05230 155 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 HOXB9P17482 250 aaPredicted RBP13.05□□□□□ -0.32
SNX12-202ENST00000374274 HLA-DPA1P20036 260 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 EPHA2P29317 976 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 GNASQ5JWF2 1037 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 SERPINA11Q86U17 422 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 GPSM1Q86YR5 675 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 PNPLA1Q8N8W4 532 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
SNX12-202ENST00000374274 KIAA1143Q96AT1 154 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms