RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 GDF10P55107 478 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 PHC1P78364 1004 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 PRR5P85299 388 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CD83Q01151 205 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 OVCA2Q8WZ82 227 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CPT1BQ92523 772 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 FXYD6Q9H0Q3 95 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CXorf21Q9HAI6 301 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 RC3H2Q9HBD1 1191 aaKnown RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 ADAMDEC1O15204 470 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 PLGP00747 810 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 CCKBRP32239 447 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 AQP4P55087 323 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 LAPTM5Q13571 262 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 RIN1Q13671 783 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 RALGPS1Q5JS13 557 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 TNFAIP8L2Q6P589 184 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 CPNE8Q86YQ8 564 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 CEP97Q8IW35 865 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 TMEM175Q9BSA9 504 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 TDP1Q9NUW8 608 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 FBXO9Q9UK97 447 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 ACSL1P33121 698 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 JAM2P57087 298 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 MREGQ8N565 214 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 BPIFB1Q8TDL5 484 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 GPR151Q8TDV0 419 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 SLC44A1Q8WWI5 657 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 TTYH2Q9BSA4 534 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 ADAM7Q9H2U9 754 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 IL1RAPQ9NPH3 570 aa14□□□□□ -0.17
TRAF1-201ENST00000373887 AJAP1Q9UKB5 411 aaPredicted RBP14□□□□□ -0.17
TRAF1-201ENST00000373887 RPP14O95059 124 aaKnown RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TYRP14679 529 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TUBG1P23258 451 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 BEND4Q6ZU67 534 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF781Q8N8C0 355 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 KCNC2Q96PR1 638 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TRMOQ9BU70 441 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TMEM98Q9Y2Y6 226 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 XRN1Q8IZH2 1706 aaKnown RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 MON2Q7Z3U7 1717 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ELOA3DA6NLF2 546 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CYP17A1P05093 508 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CPN2P22792 545 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 MLLT3P42568 568 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ELOA3BQ3SY89 546 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TSTD2Q5T7W7 516 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ELOA3Q8NG57 546 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CENPMQ9NSP4 180 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 RCOR3Q9P2K3 495 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 MYADML2A6NDP7 307 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 OR6C70A6NIJ9 312 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TLX3O43711 291 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 SGCBQ16585 318 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ARL13AQ5H913 290 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 PDE12Q6L8Q7 609 aaKnown RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 PRICKLE1Q96MT3 831 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ZDHHC4Q9NPG8 344 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 GIN1Q9NXP7 522 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 SLC17A6Q9P2U8 582 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 INSL5Q9Y5Q6 135 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF99A8MXY4 864 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 J3KR12 359 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CD2P06729 351 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 EDNRAP25101 427 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 HSD11B1P28845 292 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 GKP32189 559 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 EIF1AXP47813 144 aaKnown RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CAPZA1P52907 286 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 OR12D2P58182 307 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 WSCD2Q2TBF2 565 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 AMZ2Q86W34 360 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 OSTM1Q86WC4 334 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 SHDQ96IW2 340 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 TWNKQ96RR1 684 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 PAK6Q9NQU5 681 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 PLEKHA6Q9Y2H5 1048 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 C13orf42A0A1B0GVH6 325 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CLDN25C9JDP6 229 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 ALPPP05187 535 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 GNAO1P09471 354 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CD40LGP29965 261 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 UQCRC1P31930 480 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 IFI44LQ53G44 452 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 FBXL22Q6P050 247 aa13.99□□□□□ -0.17
TRAF1-201ENST00000373887 CENPNQ96H22 339 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 SPIN1Q9Y657 262 aaPredicted RBP13.99□□□□□ -0.17
TRAF1-201ENST00000373887 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
TRAF1-201ENST00000373887 AURKAO14965 403 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 CHRNA1P02708 482 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 KHKP50053 298 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 ODF4Q2M2E3 257 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TMEM203Q969S6 136 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 TMEM209Q96SK2 561 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 IRF2BPLQ9H1B7 796 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 SUV39H2Q9H5I1 410 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 PCDHGB5Q9Y5G0 923 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 B3GALT2O43825 422 aa13.98□□□□□ -0.17
TRAF1-201ENST00000373887 PTX3P26022 381 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms