RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 KCNH6Q9H252 994 aa16.98■□□□□ 0.31
PTPRU-202ENST00000373779 WDR6Q9NNW5 1121 aaKnown RBP16.98■□□□□ 0.31
PTPRU-202ENST00000373779 FAM118AQ9NWS6 357 aa16.98■□□□□ 0.31
PTPRU-202ENST00000373779 A0A1W2PRB8 838 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 GLTPD2A6NH11 291 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 SPIN4Q56A73 249 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 TPT1P8Q9HAU6 139 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 PRSS51A0A1B0GVH4 220 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 ARVCFO00192 962 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 FCHO2Q0JRZ9 810 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 HEPACAMQ14CZ8 416 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 TMEM236Q5W0B7 351 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 OR10T2Q8NGX3 314 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 GPSM3Q9Y4H4 160 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 PMF1-BGLAPU3KQ54 211 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 ACADMP11310 421 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 RGS1Q08116 209 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 TARDBPQ13148 414 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTPRU-202ENST00000373779 COL21A1Q96P44 957 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 WDR83Q9BRX9 315 aaKnown RBP16.97■□□□□ 0.31
PTPRU-202ENST00000373779 POLR2J3Q9H1A7 115 aaKnown RBP16.97■□□□□ 0.31
PTPRU-202ENST00000373779 SUV39H2Q9H5I1 410 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 ZW10O43264 779 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 PSIP1O75475 530 aaKnown RBP16.97■□□□□ 0.31
PTPRU-202ENST00000373779 PTCHD3Q3KNS1 767 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 TNFAIP8L2Q6P589 184 aaPredicted RBP16.97■□□□□ 0.31
PTPRU-202ENST00000373779 WRAP53Q9BUR4 548 aaKnown RBP16.97■□□□□ 0.31
PTPRU-202ENST00000373779 CEPT1Q9Y6K0 416 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 RREB1Q92766 1687 aa16.97■□□□□ 0.31
PTPRU-202ENST00000373779 SAP18O00422 153 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 GABARAPL2P60520 117 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 LRP8Q14114 963 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ZBTB6Q15916 424 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 CRTC2Q53ET0 693 aaPredicted RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 CHMP1BQ7LBR1 199 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ADAMTS15Q8TE58 950 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ABCB8Q9NUT2 735 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 A0A096LPI6 279 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ISM1B1AKI9 464 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 AURKAO14965 403 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 INHBCP55103 352 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 NFATC3Q12968 1075 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 CXorf57Q6NSI4 855 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 KRTCAP2Q8N6L1 136 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 CEP295NLQ96MC4 621 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 PDPK1O15530 556 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 MAP2K4P45985 399 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ZNHIT3Q15649 155 aaPredicted RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 TSTQ16762 297 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 TUBA3EQ6PEY2 450 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 UFD1Q92890 307 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 RFKQ969G6 155 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 PSKH2Q96QS6 385 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ANKRA2Q9H9E1 313 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 DIABLOQ9NR28 239 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 SDR39U1Q9NRG7 319 aaPredicted RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 MRPS23Q9Y3D9 190 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 FAM86C2PA6NEL3 165 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 TPST2O60704 377 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 CHRNA1P02708 482 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 SRPRAP08240 638 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 GSTM2P28161 218 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 C5orf22Q49AR2 442 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 FAM220AQ7Z4H9 259 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 RGL4Q8IZJ4 473 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 GJD3Q8N144 294 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 UBE2J2Q8N2K1 259 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ZNF655Q8N720 491 aaPredicted RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 ZBED3Q96IU2 234 aaPredicted RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 CITED4Q96RK1 184 aa16.96■□□□□ 0.31
PTPRU-202ENST00000373779 IMP3Q9NV31 184 aaKnown RBP16.96■□□□□ 0.31
PTPRU-202ENST00000373779 TLR4O00206 839 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 PTGESO14684 152 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 CHRM5P08912 532 aaPredicted RBP16.96■□□□□ 0.3
PTPRU-202ENST00000373779 GGT1P19440 569 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 NUP62P37198 522 aaPredicted RBP16.96■□□□□ 0.3
PTPRU-202ENST00000373779 PKDCCQ504Y2 493 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 KLHL22Q53GT1 634 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 MAT2BQ9NZL9 334 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 ERVK-18Q9QC07 812 aa16.96■□□□□ 0.3
PTPRU-202ENST00000373779 TCRBV3S1A0A5B6 114 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 CD247P20963 164 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 RPL4P36578 427 aaKnown RBP16.95■□□□□ 0.3
PTPRU-202ENST00000373779 ABRAXAS2Q15018 415 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 BORAQ6PGQ7 559 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 PTERQ96BW5 349 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 IL4I1Q96RQ9 567 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 FAIMQ9NVQ4 179 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 MAGEB3O15480 346 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 SLC15A1P46059 708 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 CCR4P51679 360 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 XKP51811 444 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 GK3PQ14409 553 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 CARD16Q5EG05 197 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 RAD51AP1Q96B01 352 aa16.95■□□□□ 0.3
PTPRU-202ENST00000373779 MTMR11A4FU01 709 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms