RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 STARD3Q14849 445 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 AGERQ15109 404 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 MTX3Q5HYI7 312 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 TBCELQ5QJ74 424 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 DNAJC14Q6Y2X3 702 aaPredicted RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 ERMP1Q7Z2K6 904 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 TMPRSS11BQ86T26 416 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 AMZ2Q86W34 360 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 CSGALNACT1Q8TDX6 532 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 TESCQ96BS2 214 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 HHIPQ96QV1 700 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 EBPLQ9BY08 206 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 PCDHGA11Q9Y5H2 935 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 LRATO95237 230 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 UBTFL6P0CB48 400 aaPredicted RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 ZNF26P17031 533 aaPredicted RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 PSMA4P25789 261 aaKnown RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 S100A3P33764 101 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 TAP2Q03519 686 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 MED21Q13503 144 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 FGL2Q14314 439 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 AASDHQ4L235 1098 aaPredicted RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 ZNF776Q68DI1 518 aaPredicted RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 UNC5DQ6UXZ4 953 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 PDZD3Q86UT5 571 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 LRRTM4Q86VH4 590 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 OR7G3Q8NG95 312 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 EME1Q96AY2 570 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 PPWD1Q96BP3 646 aaKnown RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 IKZF5Q9H5V7 419 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 RPF2Q9H7B2 306 aaKnown RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 SERHLQ9NQF3 203 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 ITM2CQ9NQX7 267 aa18.95■□□□□ 0.62
HDAC1-201ENST00000373548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 ZFR2Q9UPR6 939 aaKnown RBP18.95■□□□□ 0.62
HDAC1-201ENST00000373548 TRBV5-3A0A0A0MS03 114 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 MAGEA13PA6NCF6 341 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 MAGEB17A8MXT2 336 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 AKAP10O43572 662 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 ETHE1O95571 254 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 GPIP06744 558 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 HSD3B1P14060 373 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 PCSK2P16519 638 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 HSD3B2P26439 372 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 RPA4Q13156 261 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 TSTA3Q13630 321 aaPredicted RBP18.94■□□□□ 0.62
HDAC1-201ENST00000373548 CYP51A1Q16850 503 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 GTDC1Q4AE62 458 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 TMEM154Q6P9G4 183 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 GALNT4Q8N4A0 578 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 ZNF583Q96ND8 569 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 TEX101Q9BY14 249 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 MKRN2Q9H000 416 aaKnown RBP18.94■□□□□ 0.62
HDAC1-201ENST00000373548 PAIP1Q9H074 479 aaKnown RBP18.94■□□□□ 0.62
HDAC1-201ENST00000373548 BRF2Q9HAW0 419 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 TM7SF3Q9NS93 570 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 SLC6A13Q9NSD5 602 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 CNOT11Q9UKZ1 510 aaKnown RBP18.94■□□□□ 0.62
HDAC1-201ENST00000373548 AK5Q9Y6K8 562 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 TXNDC9O14530 226 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 CYP4F3Q08477 520 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 IRF4Q15306 451 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 RUNDC3AQ59EK9 446 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 CATSPEREQ5SY80 951 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 MTSS1LQ765P7 747 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 PROSER1Q86XN7 944 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 OXR1Q8N573 874 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 DTWD1Q8N5C7 304 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 HUS1BQ8NHY5 278 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 GFM2Q969S9 779 aaKnown RBP18.94■□□□□ 0.62
HDAC1-201ENST00000373548 C11orf24Q96F05 449 aaPredicted RBP18.94■□□□□ 0.62
HDAC1-201ENST00000373548 COQ10BQ9H8M1 238 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 ASF1AQ9Y294 204 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 MAN2B2Q9Y2E5 1009 aa18.94■□□□□ 0.62
HDAC1-201ENST00000373548 F5P12259 2224 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 HNRNPRO43390 633 aaKnown RBP18.93■□□□□ 0.62
HDAC1-201ENST00000373548 SMNDC1O75940 238 aaKnown RBP eCLIP18.93■□□□□ 0.62
HDAC1-201ENST00000373548 B3GALT4O96024 378 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 LYNP07948 512 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 PCNAP12004 261 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 IL10P22301 178 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 MTHFRP42898 656 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 PNLIPRP1P54315 467 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 HTR4Q13639 388 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 PGS1Q32NB8 556 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 TMEM196Q5HYL7 178 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 GLYATQ6IB77 296 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 PHC3Q8NDX5 983 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 OR5AR1Q8NGP9 310 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 KLK6Q92876 244 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 WDR34Q96EX3 536 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 KCNH6Q9H252 994 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 CLDND1Q9NY35 253 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 MAGEL2Q9UJ55 1249 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 DYRK1BQ9Y463 629 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 OR1A2Q9Y585 309 aa18.93■□□□□ 0.62
HDAC1-201ENST00000373548 PAK4O96013 591 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 BMP2P12643 396 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ACSM2AQ08AH3 577 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms