RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 CATP04040 527 aaKnown RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MMP8P22894 467 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 GNALP38405 381 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TANGO2Q6ICL3 276 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TXNDC5Q8NBS9 432 aaKnown RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 LRFN5Q96NI6 719 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 LAMP5Q9UJQ1 280 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 DPYSL4O14531 572 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 HTRA2O43464 458 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MT-ND5P03915 603 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ALPPP05187 535 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 FGFR1P11362 822 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NR2C1P13056 603 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MLLT3P42568 568 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 PTPN9P43378 593 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CDK3Q00526 305 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF177Q13360 481 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CLPPQ16740 277 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SCGB2B2Q4G0G5 96 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF627Q7L945 461 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TMEM80Q96HE8 168 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NTN4Q9HB63 628 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ZFP14Q9HCL3 533 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TAS2R50P59544 299 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CAP1Q01518 475 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 GAREM2Q75VX8 874 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 FAM35AQ86V20 835 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 RETREG3Q86VR2 466 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SIAH1Q8IUQ4 282 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NEIL3Q8TAT5 605 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 LENG9Q96B70 501 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 FAM237AA0A1B0GTK4 181 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NPC1O15118 1278 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 RAB3DO95716 219 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 PRPS2P11908 318 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CALCRP30988 508 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TAS2R39P59534 338 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CD47Q08722 323 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MAMLD1Q13495 774 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF512Q96ME7 567 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 OR51J1Q9H342 316 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NT5MQ9NPB1 228 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 RNF146Q9NTX7 359 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NDRG3Q9UGV2 375 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 PRELID3BQ9Y3B1 194 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ABCA7Q8IZY2 2146 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TMEM2Q9UHN6 1383 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CHD3Q12873 2000 aaKnown RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TCAF2A6NFQ2 919 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MT-CO2P00403 227 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MT-ND1P03886 318 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CD44P16070 742 aaKnown RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SERPINA4P29622 427 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MAGEA11P43364 429 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF132P52740 706 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 LGALS12Q96DT0 336 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 DOCK8Q8NF50 2099 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 AGRPO00253 132 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SGPL1O95470 568 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TYRP14679 529 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 DPP6P42658 865 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 PRR5P85299 388 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 IRF8Q02556 426 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NLRP8Q86W28 1048 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CHAC2Q8WUX2 184 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SGK3Q96BR1 496 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 FERD3LQ96RJ6 166 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TCEAL2Q9H3H9 227 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 RNF121Q9H920 327 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 HRH3Q9Y5N1 445 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 A0A0D9SG52 128 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CDRT1O95170 752 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CDK4P11802 303 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 CDH12P55289 794 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 MLLT1Q03111 559 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 POU4F2Q12837 409 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 RFPL4BQ6ZWI9 263 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SLC41A1Q8IVJ1 513 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 LFNGQ8NES3 379 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ABHD11Q8NFV4 315 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ELP5Q8TE02 316 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 TLR5O60602 858 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 LYPLA1O75608 230 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 STT3AP46977 705 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 IDH3AP50213 366 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 RNF4P78317 190 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 FAM46CQ5VWP2 391 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 NOTUMQ6P988 496 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ABCG4Q9H172 646 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ATG5Q9H1Y0 275 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 GPN2Q9H9Y4 310 aaPredicted RBP6.88□□□□□ -1.31
CSMD2-206ENST00000373388 SCPEP1Q9HB40 452 aa6.88□□□□□ -1.31
CSMD2-206ENST00000373388 ERVV-1B6SEH8 477 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms