RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NEK2P51955 445 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 LAPTM5Q13571 262 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 C10orf62Q5T681 223 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC30A9Q6PML9 568 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 GK5Q6ZS86 529 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 PARP9Q8IXQ6 854 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 LMNTD1Q8N9Z9 388 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 C1orf50Q9BV19 199 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 ACPTQ9BZG2 426 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 MMADHCQ9H3L0 296 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 EFCAB1Q9HAE3 211 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 C1orf109Q9NX04 203 aa25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 SCHIP1Q9P0W5 487 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-202ENST00000371937 COL6A3P12111 3177 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 MEI4A8MW99 385 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 K7ESF4 209 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 RSL1D1O76021 490 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 CD1EP15812 388 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 PRPH2P23942 346 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 BLKP51451 505 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 CSTF3Q12996 717 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 FZD2Q14332 565 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 HIST2H2ACQ16777 129 aaPredicted RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 RFTN2Q52LD8 501 aaPredicted RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 PDCD4Q53EL6 469 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 HIST2H2AA3Q6FI13 130 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 NXPE4Q6UWF7 544 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 MFSD2AQ8NA29 543 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 CCL4L1Q8NHW4 92 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 WDR20Q8TBZ3 569 aa25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 UTP4Q969X6 686 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 EIF3LQ9Y262 564 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-202ENST00000371937 NPIPB8E9PQR5 432 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 SEC22BO75396 215 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 VARSP26640 1264 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 EIF2B5Q13144 721 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 MED27Q6P2C8 311 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 ZFAND4Q86XD8 727 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 C2orf73Q8N5S3 287 aaPredicted RBP25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 GPBAR1Q8TDU6 330 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 GSDMCQ9BYG8 508 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 KIR3DX1Q9H7L2 352 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 AIM2O14862 343 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 F3P13726 295 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 HSD3B1P14060 373 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 HSD3B2P26439 372 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 RPL38P63173 70 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 CATSPEREQ5SY80 951 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 IL23RQ5VWK5 629 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 IQCHQ86VS3 1027 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 PARGQ86W56 976 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 C17orf64Q86WR6 236 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 DEFB119Q8N690 84 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 KYQ8NBH2 561 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 OR52E1Q8NGJ3 308 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 OR9I1Q8NGQ6 314 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 OR2L8Q8NGY9 312 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 MRPL1Q9BYD6 325 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 SLC40A1Q9NP59 571 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 NDE1Q9NXR1 346 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 ZIM2Q9NZV7 527 aa25.4■■□□□ 1.66
ATPAF1-202ENST00000371937 MAP3K13O43283 966 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 CD38P28907 300 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 PKLRP30613 574 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 PGM1P36871 562 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 NME5P56597 212 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 RACK1P63244 317 aaKnown RBP25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 SLC25A3Q00325 362 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 NRROSQ86YC3 692 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 FUNDC1Q8IVP5 155 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 PHACTR4Q8IZ21 702 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 OR7G3Q8NG95 312 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 UBE2E3Q969T4 207 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 RCN3Q96D15 328 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 CMTM7Q96FZ5 175 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 BRF2Q9HAW0 419 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 CD320Q9NPF0 282 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 ASIC5Q9NY37 505 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 TAC3Q9UHF0 121 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 SH2B3Q9UQQ2 575 aa25.39■■□□□ 1.65
ATPAF1-202ENST00000371937 A6NCN8 305 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 SLC22A3O75751 556 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 PCSK2P16519 638 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 NUDT2P50583 147 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 TCEA2Q15560 299 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 MMEL1Q495T6 779 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 CACHD1Q5VU97 1274 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 LINC01555Q8NAE3 123 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 TSPEARQ8WU66 669 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 CXorf40BQ96DE9 158 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 GEMIN8Q9NWZ8 242 aaKnown RBP25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 TMED5Q9Y3A6 229 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 LRP4O75096 1905 aa25.38■■□□□ 1.65
ATPAF1-202ENST00000371937 EML2O95834 649 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 ART3Q13508 389 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 SLBPQ14493 270 aaKnown RBP eCLIP25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 C16orf89Q6UX73 402 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 ACAT2Q9BWD1 397 aa25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 POLR3HQ9Y535 204 aaPredicted RBP25.37■■□□□ 1.65
ATPAF1-202ENST00000371937 SLCO1B1Q9Y6L6 691 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms