RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 GOLGA6L10A6NI86 522 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 AGAP14A8MT82 685 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 PRRG2O14669 202 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 PRICKLE3O43900 615 aaPredicted RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 OR1I1O60431 355 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 RNASEH1O60930 286 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 TMEM127O75204 238 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 TIPRLO75663 272 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SRP72O76094 671 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 RECQL5O94762 991 aaPredicted RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 MT-ND3P03897 115 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ALDOAP04075 364 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 ITGA2BP08514 1039 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SNRPAP09012 282 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 ZNF30P17039 623 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 OAS2P29728 719 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 SPRP35270 261 aaPredicted RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 SPAM1P38567 509 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 HADHAP40939 763 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CD151P48509 253 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SERPINB9P50453 376 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CSRP3P50461 194 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SUOXP51687 545 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 LIMK2P53671 638 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SEC24CP53992 1094 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ZXDAP98168 799 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CREB5Q02930 508 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SLC18A2Q05940 514 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CACNG1Q06432 222 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ARHGEF7Q14155 803 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ACOX1Q15067 660 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 TYSND1Q2T9J0 566 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ATP13A5Q4VNC0 1218 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SETMARQ53H47 684 aaPredicted RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 FASTKD1Q53R41 847 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 RBM20Q5T481 1227 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 KIAA0408Q6ZU52 694 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 TAS2R42Q7RTR8 314 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SERPINA9Q86WD7 417 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SRRM1Q8IYB3 904 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 UBALD2Q8IYN6 164 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 C4orf33Q8N1A6 199 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 OTUD6BQ8N6M0 293 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ZNF398Q8TD17 642 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 LPGAT1Q92604 370 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 HTRA1Q92743 480 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 RAB7BQ96AH8 199 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CLDN23Q96B33 292 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 SIPA1Q96FS4 1042 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ATXN7L3BQ96GX2 97 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 RSRC1Q96IZ7 334 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 VPS39Q96JC1 886 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 MAELQ96JY0 434 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 NDNQ99608 321 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 FOXB1Q99853 325 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 OMDQ99983 421 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 TACO1Q9BSH4 297 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 SOX7Q9BT81 388 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CNPPD1Q9BV87 410 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 C12orf65Q9H3J6 166 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 RHOJQ9H4E5 214 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 FAM83DQ9H4H8 585 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 CAB39LQ9H9S4 337 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 TBC1D17Q9HA65 648 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 DYRK4Q9NR20 520 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 FBXL12Q9NXK8 326 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 GALPQ9UBC7 116 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 ZFR2Q9UPR6 939 aaKnown RBP3.49□□□□□ -1.85
MCF2-202ENST00000370573 IKBKGQ9Y6K9 419 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 PRSS21Q9Y6M0 314 aa3.49□□□□□ -1.85
MCF2-202ENST00000370573 PLXNB3Q9ULL4 1909 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ZNF106Q9H2Y7 1883 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 IQANK1A0A1B0GTG1 560 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 A0A1W2PRQ8 180 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 RGSL1A5PLK6 1076 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TTC36A6NLP5 189 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 C10orf142B7Z368 130 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 H0Y858 1186 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 GOLGA8RI6L899 631 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 K7ESM1 405 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 POLR3GO15318 223 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 PLRG1O43660 514 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 PI15O43692 258 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TYROBPO43914 113 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TMCC2O75069 709 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SPAG7O75391 227 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KRT38O76015 456 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 SOD1P00441 154 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 PDGFBP01127 241 aaPredicted RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 ELFN1P0C7U0 828 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 C6P13671 934 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 KRT4P19013 534 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 OGNP20774 298 aaKnown RBP3.48□□□□□ -1.85
MCF2-202ENST00000370573 FMO4P31512 558 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 MAGEA12P43365 314 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TPMTP51580 245 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 ARFIP2P53365 341 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 CDKN2DP55273 166 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 TAS2R39P59534 338 aa3.48□□□□□ -1.85
MCF2-202ENST00000370573 B4GALNT1Q00973 533 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms