RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PTERQ96BW5 349 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 ZNF501Q96CX3 271 aaPredicted RBP14.27□□□□□ -0.12
COL9A1-204ENST00000370496 MTBPQ96DY7 904 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 RNF31Q96EP0 1072 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 ALG9Q9H6U8 611 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 FAM60AQ9NP50 221 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 SLC6A20Q9NP91 592 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 IGSF5Q9NSI5 407 aa14.27□□□□□ -0.12
COL9A1-204ENST00000370496 PCM1Q15154 2024 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 SUPT3HB4E1H0 165 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 RRP8O43159 456 aaKnown RBP14.26□□□□□ -0.13
COL9A1-204ENST00000370496 KERAO60938 352 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 SUPT3HO75486 399 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 STK17BO94768 372 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 SHBGP04278 402 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CAPNS1P04632 268 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 TUBBP07437 444 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 MSL3P1P0C860 447 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 LIPCP11150 499 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 GCAP28676 217 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 GRIA3P42263 894 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 MAGEA12P43365 314 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 GLRBP48167 497 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 HNMTP50135 292 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ITGA1P56199 1179 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ABATP80404 500 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CDKL1Q00532 357 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 DLG1Q12959 904 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ST3GAL2Q16842 350 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 BPHLQ86WA6 291 aaPredicted RBP14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ZFAND4Q86XD8 727 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 LRRC56Q8IYG6 542 aaPredicted RBP14.26□□□□□ -0.13
COL9A1-204ENST00000370496 GPR135Q8IZ08 494 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CENPLQ8N0S6 344 aaPredicted RBP14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CNPY4Q8N129 248 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 STAG3L4Q8TBR4 150 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CAVIN3Q969G5 261 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 KIAA1191Q96A73 305 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 PYCR2Q96C36 320 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 NXNL1Q96CM4 212 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 DPH7Q9BTV6 452 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CHRNA10Q9GZZ6 450 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 PPCSQ9HAB8 311 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 WWOXQ9NZC7 414 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 CD274Q9NZQ7 290 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ANKMY1Q9P2S6 941 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 TBK1Q9UHD2 729 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ACSL6Q9UKU0 697 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 ZMIZ1Q9ULJ6 1067 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 APC2O95996 2303 aa14.26□□□□□ -0.13
COL9A1-204ENST00000370496 TARM1B6A8C7 271 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 SCRG1O75711 98 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 KIAA0754O94854 1291 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 SLCO1A2P46721 670 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 CSRP3P50461 194 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 ATP1A2P50993 1020 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 PRDX1Q06830 199 aaKnown RBP14.25□□□□□ -0.13
COL9A1-204ENST00000370496 IFFO1Q0D2I5 559 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 ZC3H12BQ5HYM0 836 aaKnown RBP14.25□□□□□ -0.13
COL9A1-204ENST00000370496 FCRL6Q6DN72 434 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 PWWP2BQ6NUJ5 590 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 LRRC69Q6ZNQ3 347 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 C17orf64Q86WR6 236 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 TCAIMQ8N3R3 496 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 OR56A3Q8NH54 315 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 OR1L3Q8NH93 324 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 ZUFSPQ96AP4 578 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 SGPP1Q9BX95 441 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 SLC7A5P2Q9GIP4 190 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 PCMTD2Q9NV79 361 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 NUDT4Q9NZJ9 180 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 PLCL2Q9UPR0 1127 aa14.25□□□□□ -0.13
COL9A1-204ENST00000370496 MAP1BP46821 2468 aaKnown RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 SYCE1LA8MT33 242 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 E7EQ34 232 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 NRP2O60462 931 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 CPNE3O75131 537 aaKnown RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 OR2B3O76000 313 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 KLHL2O95198 593 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 TIAF1O95411 115 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 EIF2S3P41091 472 aaKnown RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 YBX1P67809 324 aaKnown RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 NAA30Q147X3 362 aaPredicted RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 TSNAXIP1Q2TAA8 658 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 PTCHD3Q3KNS1 767 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 LCTLQ6UWM7 567 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 PDPRQ8NCN5 879 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 EPS8L3Q8TE67 593 aaKnown RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 CABS1Q96KC9 395 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 SELENOSQ9BQE4 189 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 CNOT10Q9H9A5 744 aaKnown RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 CUEDC1Q9NWM3 386 aaPredicted RBP14.24□□□□□ -0.13
COL9A1-204ENST00000370496 EURLQ9NYK6 297 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 SERTAD3Q9UJW9 196 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 RAB21Q9UL25 225 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 DYRK1BQ9Y463 629 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 TMEM184BQ9Y519 407 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms