RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TRAP1Q12931 704 aaKnown RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 TRIP10Q15642 601 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 LRRC36Q1X8D7 754 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 ZXDCQ2QGD7 858 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 XKR5Q6UX68 686 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 ASB11Q8WXH4 323 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 DNASE2BQ8WZ79 361 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 OR1E3Q8WZA6 343 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 TSACCQ96A04 125 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 WDR92Q96MX6 357 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 SLC12A9Q9BXP2 914 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 KLHL4Q9C0H6 718 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 TM9SF3Q9HD45 589 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 ARL15Q9NXU5 204 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 ZIM2Q9NZV7 527 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 CCL27Q9Y4X3 112 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PRSS51A0A1B0GVH4 220 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PRSS38A1L453 326 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 NME4O00746 187 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 C8GP07360 202 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 ENO2P09104 434 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 SP9P0CG40 484 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 EPB42P16452 691 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 CD38P28907 300 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 GGT5P36269 586 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 KCNK10P57789 538 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 RACK1P63244 317 aaKnown RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 CDKL1Q00532 357 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 EMX2Q04743 252 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 ZNF658BQ4V348 819 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 SFT2D3Q587I9 215 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PMS2CLQ68D20 193 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 CHST15Q7LFX5 561 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 RD3Q7Z3Z2 195 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 LRRTM4Q86VH4 590 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 SPATA24Q86W54 205 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PDSS2Q86YH6 399 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PROKR1Q8TCW9 393 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 VPS33AQ96AX1 596 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PARVBQ9HBI1 364 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 GPR27Q9NS67 375 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 GMPR2Q9P2T1 348 aaKnown RBP16.78■□□□□ 0.28
UBE3D-203ENST00000369747 RNF11Q9Y3C5 154 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 PLEKHM1Q9Y4G2 1056 aa16.78■□□□□ 0.28
UBE3D-203ENST00000369747 A0A1W2PR77 199 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 GPR89AB7ZAQ6 455 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 EEDO75530 441 aaKnown RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 C8BP07358 591 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 GPR89BP0CG08 455 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 EPORP19235 508 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 GNPDA1P46926 289 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 PREPP48147 710 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 DHPSP49366 369 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 POLR2JP52435 117 aaKnown RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 YBX1P67809 324 aaKnown RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 BLMHQ13867 455 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 NR6A1Q15406 480 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 TCEA2Q15560 299 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 PLK5Q496M5 336 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 PYCR3Q53H96 274 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 OGFRL1Q5TC84 451 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 PRMT9Q6P2P2 845 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 RNF165Q6ZSG1 346 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 CFAP206Q8IYR0 622 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 LRRC58Q96CX6 371 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 KLHDC7BQ96G42 594 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 SCARF2Q96GP6 870 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 LINC00615Q96LM1 132 aaPredicted RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 VCX3BQ9H321 246 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 CARS2Q9HA77 564 aaKnown RBP16.77■□□□□ 0.28
UBE3D-203ENST00000369747 TMEM45AQ9NWC5 275 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 GID8Q9NWU2 228 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 TRPS1Q9UHF7 1281 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 RIMS3Q9UJD0 308 aa16.77■□□□□ 0.28
UBE3D-203ENST00000369747 SPTY2D1-AS1A0A0U1RR47 76 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 FAM234BA2RU67 622 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 GFYI3L273 518 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 FFAR3O14843 346 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 GPR42O15529 346 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 DNAJA2O60884 412 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 EBLN1P0CF75 366 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 KELP23276 732 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 SLC6A2P23975 617 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 PIK3CGP48736 1102 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 CAPRIN1Q14444 709 aaKnown RBP16.76■□□□□ 0.27
UBE3D-203ENST00000369747 NFE2L1Q14494 772 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 ALG11Q2TAA5 492 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 AP5B1Q2VPB7 878 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 ZNF542PQ5EBM4 170 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 PAGE3Q5JUK9 113 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 IRGCQ6NXR0 463 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 FAM83HQ6ZRV2 1179 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-203ENST00000369747 GALNT13Q8IUC8 556 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 SLC15A3Q8IY34 581 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 LILRA2Q8N149 483 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 MFSD2AQ8NA29 543 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 SKA2Q8WVK7 121 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-203ENST00000369747 ASZ1Q8WWH4 475 aa16.76■□□□□ 0.27
UBE3D-203ENST00000369747 ACTL8Q9H568 366 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms