RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CEP97Q8IW35 865 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 CXorf40BQ96DE9 158 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 CLIP3Q96DZ5 547 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF599Q96NL3 588 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PKP4Q99569 1192 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 HS3ST4Q9Y661 456 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PRORSD1PA6NEY8 169 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 NEDD8-MDP1E9PL57 170 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PTGES3Q15185 160 aaKnown RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ANKDD1AQ495B1 522 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 C6orf136Q5SQH8 315 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 CMTR2Q8IYT2 770 aaKnown RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 AQP11Q8NBQ7 271 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 OR8J3Q8NGG0 315 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF675Q8TD23 568 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF431Q8TF32 576 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 XYLT2Q9H1B5 865 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 OR51V1Q9H2C8 321 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 IMP3Q9NV31 184 aaKnown RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 MYH15Q9Y2K3 1946 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 SAP18O00422 153 aaKnown RBP15.53■□□□□ 0.08
COL17A1-202ENST00000369733 BMP2P12643 396 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GSTM2P28161 218 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 DGKEP52429 567 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 JAZF1Q86VZ6 243 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 DNASE1L2Q92874 299 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 LGALS12Q96DT0 336 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 MED11Q9P086 117 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 DPP7Q9UHL4 492 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 TRBC2A0A5B9 178 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 CSF2P04141 144 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GABRR2P28476 465 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GDF5P43026 501 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 AGTR2P50052 363 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 ADAM15Q13444 863 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 BTBD16Q32M84 506 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 FRG2Q64ET8 278 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 SERPINA13PQ6UXR4 307 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 C15orf39Q6ZRI6 1047 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GOLM1Q8NBJ4 401 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 NSUN5Q96P11 429 aaKnown RBP15.53■□□□□ 0.08
COL17A1-202ENST00000369733 FRG2BQ96QU4 278 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 FAM118AQ9NWS6 357 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 FNIP2Q9P278 1114 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GTPBP1O00178 669 aaKnown RBP15.53■□□□□ 0.08
COL17A1-202ENST00000369733 DLGAP1O14490 977 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 NRP1O14786 923 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 IFNA6P05013 189 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 CDK4P11802 303 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 SMPD1P17405 629 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 ARF5P84085 180 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 SEMA3AQ14563 771 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 OR5AK3PQ8NH89 298 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 MNTQ99583 582 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 TBX5Q99593 518 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 UCK2Q9BZX2 261 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 OR2B2Q9GZK3 357 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 C14orf119Q9NWQ9 140 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 OSER1Q9NX31 292 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 TBC1D14Q9P2M4 693 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 PTGDR2Q9Y5Y4 395 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 H3BMQ9 156 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 SLC25A12O75746 678 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GSTT2BP0CG30 244 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 GABARAPL2P60520 117 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 DSTNP60981 165 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 ATP13A5Q4VNC0 1218 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 FBXL22Q6P050 247 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 LRRC70Q7Z2Q7 622 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
COL17A1-202ENST00000369733 TOMM5Q8N4H5 51 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 COG8Q96MW5 612 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 CKLFQ9UBR5 152 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 MLXQ9UH92 298 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 FBXO10Q9UK96 956 aa15.53■□□□□ 0.08
COL17A1-202ENST00000369733 PEPDP12955 493 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 PLEKHG7Q6ZR37 379 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 FAM110BQ8TC76 370 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 TMEM80Q96HE8 168 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 SYT11Q9BT88 431 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 TTLL2Q9BWV7 592 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 CALML5Q9NZT1 146 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 MYH7P12883 1935 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 MT-ND2P03891 347 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 CPN2P22792 545 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 GNG2P59768 71 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 SMCO1Q147U7 214 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 UNC50Q53HI1 259 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 TMEM135Q86UB9 458 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 CCDC28AQ8IWP9 274 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 MAPK15Q8TD08 544 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 TSEN15Q8WW01 171 aaKnown RBP15.52■□□□□ 0.08
COL17A1-202ENST00000369733 TMED9Q9BVK6 235 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 DPAGT1Q9H3H5 408 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 ELAC1Q9H777 363 aaKnown RBP15.52■□□□□ 0.08
COL17A1-202ENST00000369733 POPDC3Q9HBV1 291 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 PCDHGA7Q9Y5G6 932 aa15.52■□□□□ 0.08
COL17A1-202ENST00000369733 DFNA5O60443 496 aa15.52■□□□□ 0.07
COL17A1-202ENST00000369733 HCN1O60741 890 aa15.52■□□□□ 0.07
COL17A1-202ENST00000369733 EEDO75530 441 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms