RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TBRG1Q3YBR2 411 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 XAF1Q6GPH4 301 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF544Q6NX49 715 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CIR1Q86X95 450 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ARHGEF39Q8N4T4 335 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 OR5H6Q8NGV6 325 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 C11orf24Q96F05 449 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 MENTQ9BUN1 341 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 TEX101Q9BY14 249 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.69□□□□□ -1.343e-6■■□□□ 12
CSDE1-204ENST00000369530 STAP1Q9ULZ2 295 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 GRIP1Q9Y3R0 1128 aa6.69□□□□□ -1.34
CSDE1-204ENST00000369530 ARID1BQ8NFD5 2236 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-204ENST00000369530 NCOR1O75376 2440 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SLC12A8A0AV02 714 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TYW5A2RUC4 315 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 DNALI1O14645 258 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SNPHO15079 494 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ABCB7O75027 752 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 DEAF1O75398 565 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SORBS2O94875 1100 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 NADKO95544 446 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SFTPCP11686 197 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ACP1P24666 158 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 STK19P49842 368 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TNK1Q13470 666 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 GBX1Q14549 363 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ACAP2Q15057 778 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 HIST2H2ACQ16777 129 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 PARP15Q460N3 678 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SNAP47Q5SQN1 464 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 METTL11BQ5VVY1 283 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 GPR107Q5VW38 600 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 LYPD8Q6UX82 237 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TRMT11Q7Z4G4 463 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SLC22A16Q86VW1 577 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 UBQLNLQ8IYU4 475 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ZFPM2Q8WW38 1151 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SLC44A1Q8WWI5 657 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 HHIPQ96QV1 700 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 NAA50Q9GZZ1 169 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF385DQ9H6B1 395 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF556Q9HAH1 456 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SEMA4GQ9NTN9 838 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 USP22Q9UPT9 525 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SHOC2Q9UQ13 582 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 IGLV3-16A0A075B6K0 115 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 EDDM13A0A1B0GTR0 161 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TCRBV3S1A0A5B6 114 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 C16orf96A6NNT2 1141 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 AURKAO14965 403 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 PTP4A3O75365 173 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TOP3BO95985 862 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SLC2A3P11169 496 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 RALBP11234 206 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TIMP2P16035 220 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 CD6P30203 668 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 HTR3AP46098 478 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 GRIA4P48058 902 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 CENPAP49450 140 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 HK2P52789 917 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 NME5P56597 212 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SSTP61278 116 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 VAC14Q08AM6 782 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TRAF2Q12933 501 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 TEAD4Q15561 434 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 C10orf120Q5SQS8 335 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 PRR23BQ6ZRT6 265 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 NKAIN4Q8IVV8 208 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 RHOXF1Q8NHV9 184 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 NETO1Q8TDF5 533 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 FAM122AQ96E09 287 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ZYG11BQ9C0D3 744 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SLC39A8Q9C0K1 460 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ARNT2Q9HBZ2 717 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 DDIT4Q9NX09 232 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 COPG2Q9UBF2 871 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ATP6V1HQ9UI12 483 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SLCO3A1Q9UIG8 710 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 C1orf232A0A0U1RR37 186 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 OR6C65A6NJZ3 312 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 H3BMM5 538 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 PLOD2O00469 737 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 RAD51BO15315 384 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 FGF10O15520 208 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 WISP3O95389 354 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 APODP05090 189 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 BMP4P12644 408 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF30P17039 623 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 C5AR1P21730 350 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ACSL1P33121 698 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 ETV6P41212 452 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 GPX6P59796 221 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 BNIP2Q12982 314 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 SKIV2LQ15477 1246 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 HEATR6Q6AI08 1181 aaKnown RBP6.68□□□□□ -1.34
CSDE1-204ENST00000369530 C11orf96Q7Z7L8 435 aa6.68□□□□□ -1.34
CSDE1-204ENST00000369530 PAF1Q8N7H5 531 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms