RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 FAM47E-STBD1D6RA91 191 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 AP3D1O14617 1153 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 TNFRSF1BP20333 461 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 SLC19A1P41440 591 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 OR1G1P47890 313 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 DGKEP52429 567 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 IL18R1Q13478 541 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 USP39Q53GS9 565 aaKnown RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 TPRG1LQ5T0D9 272 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 RSBN1Q5VWQ0 802 aaPredicted RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 CCBE1Q6UXH8 406 aaPredicted RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 CALHM3Q86XJ0 350 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 SH3GL1Q99961 368 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 REXO4Q9GZR2 422 aaKnown RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 RNF6Q9Y252 685 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
PRKN-205ENST00000366897 TNPO3Q9Y5L0 923 aaKnown RBP13.22□□□□□ -0.29
PRKN-205ENST00000366897 IFRD1O00458 451 aaPredicted RBP13.21□□□□□ -0.29
PRKN-205ENST00000366897 DSCR3O14972 297 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 NUAK1O60285 661 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 SLC25A14O95258 325 aaPredicted RBP13.21□□□□□ -0.29
PRKN-205ENST00000366897 PDYNP01213 254 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 GRK3P35626 688 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 CASP3P42574 277 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 ARHGDIAP52565 204 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 RPS14P62263 151 aaKnown RBP13.21□□□□□ -0.29
PRKN-205ENST00000366897 ATXN7L2Q5T6C5 722 aaPredicted RBP13.21□□□□□ -0.29
PRKN-205ENST00000366897 ATG9BQ674R7 924 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.21□□□□□ -0.29
PRKN-205ENST00000366897 GATAD2AQ86YP4 633 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 METTL4Q8N3J2 472 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 FBXO44Q9H4M3 255 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 NDRG4Q9ULP0 352 aaKnown RBP13.21□□□□□ -0.29
PRKN-205ENST00000366897 SNX8Q9Y5X2 465 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 PIKFYVEQ9Y2I7 2098 aa13.21□□□□□ -0.29
PRKN-205ENST00000366897 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.3
PRKN-205ENST00000366897 PABPN1LA6NDY0 278 aaKnown RBP13.21□□□□□ -0.3
PRKN-205ENST00000366897 METTL15A6NJ78 407 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 RFXANKO14593 260 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 ESR1P03372 595 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 NUDT7P0C024 238 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 ELNP15502 786 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 PTPN6P29350 595 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 IDH2P48735 452 aaKnown RBP13.21□□□□□ -0.3
PRKN-205ENST00000366897 TIGD6Q17RP2 521 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 ZC3H12BQ5HYM0 836 aaKnown RBP13.21□□□□□ -0.3
PRKN-205ENST00000366897 KIAA1614Q5VZ46 1190 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 SERPINA9Q86WD7 417 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 DENND1CQ8IV53 801 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 P3H2Q8IVL5 708 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 TMEM132CQ8N3T6 1108 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 PARP16Q8N5Y8 322 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 SLC38A4Q969I6 547 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 HSH2DQ96JZ2 352 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 APOLD1Q96LR9 279 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 TTPALQ9BTX7 342 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 CENPOQ9BU64 300 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 CDADC1Q9BWV3 514 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 ITPAQ9BY32 194 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 GPR63Q9BZJ6 419 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 MAGIXQ9H6Y5 334 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 IL1RAPQ9NPH3 570 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 TRMT13Q9NUP7 481 aaKnown RBP13.21□□□□□ -0.3
PRKN-205ENST00000366897 TMEM184CQ9NVA4 438 aa13.21□□□□□ -0.3
PRKN-205ENST00000366897 THUMPD1Q9NXG2 353 aaKnown RBP13.21□□□□□ -0.3
PRKN-205ENST00000366897 TLL1O43897 1013 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CPSF4O95639 269 aaKnown RBP13.2□□□□□ -0.3
PRKN-205ENST00000366897 PTGER3P43115 390 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 HNRNPFP52597 415 aaKnown RBP13.2□□□□□ -0.3
PRKN-205ENST00000366897 GDPD3Q7L5L3 318 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 VASH1Q7L8A9 365 aaPredicted RBP13.2□□□□□ -0.3
PRKN-205ENST00000366897 PRSS48Q7RTY5 328 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 ADGRG2Q8IZP9 1017 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 OR52J3Q8NH60 311 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 ZNF486Q96H40 463 aaPredicted RBP13.2□□□□□ -0.3
PRKN-205ENST00000366897 TXNDC15Q96J42 360 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CLPBQ9H078 707 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 NEK6Q9HC98 313 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 GPR83Q9NYM4 423 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CYP7B1O75881 506 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 STSP08842 583 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CR2P20023 1033 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 GKP32189 559 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 NPRL3Q12980 569 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CAMK2GQ13555 558 aaPredicted RBP13.2□□□□□ -0.3
PRKN-205ENST00000366897 THOC7Q6I9Y2 204 aaKnown RBP13.2□□□□□ -0.3
PRKN-205ENST00000366897 ZNF621Q6ZSS3 439 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CLECL1Q8IZS7 167 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 SELENOMQ8WWX9 145 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 MAL2Q969L2 176 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 APIPQ96GX9 242 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms