RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CASKO14936 926 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 TNFRSF21O75509 655 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 SOD2P04179 222 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 IFNA16P05015 189 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 C8BP07358 591 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 BCKDHAP12694 445 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 AMD1P17707 334 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 RFC2P35250 354 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 ATP6AP1Q15904 470 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 RAB41Q5JT25 222 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 ALKAL1Q6UXT8 129 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 HACD2Q6Y1H2 254 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 CHMP1BQ7LBR1 199 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 KLK6Q92876 244 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 RERGQ96A58 199 aaPredicted RBP15.91■□□□□ 0.14
SCAF1-201ENST00000360565 GPATCH1Q9BRR8 931 aaKnown RBP15.91■□□□□ 0.14
SCAF1-201ENST00000360565 OR51B5Q9H339 312 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 OR10H1Q9Y4A9 318 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 COL16A1Q07092 1604 aaPredicted RBP15.91■□□□□ 0.14
SCAF1-201ENST00000360565 CCDC182A6NF36 153 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 H3BNH8 94 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 ZNF182P17025 639 aaPredicted RBP15.91■□□□□ 0.14
SCAF1-201ENST00000360565 FPR1P21462 350 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 HMGCLP35914 325 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 CLCN4P51793 760 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 DGKEP52429 567 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 SRP54P61011 504 aaKnown RBP15.91■□□□□ 0.14
SCAF1-201ENST00000360565 RAB14P61106 215 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 MXD1Q05195 221 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 GRIK2Q13002 908 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 MZT2BQ6NZ67 158 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 SLC38A4Q969I6 547 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 ZNF347Q96SE7 839 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 SLC29A1Q99808 456 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 TREX1Q9NSU2 369 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 ZCCHC3Q9NUD5 404 aaKnown RBP15.91■□□□□ 0.14
SCAF1-201ENST00000360565 ARAP2Q8WZ64 1704 aa15.91■□□□□ 0.14
SCAF1-201ENST00000360565 HAT1O14929 419 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 MZT2AQ6P582 158 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ZNF773Q6PK81 442 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 NEK10Q6ZWH5 1172 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 SRFBP1Q8NEF9 429 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ZNF514Q96K75 400 aaPredicted RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 IL4I1Q96RQ9 567 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 TDP1Q9NUW8 608 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 TUBA8Q9NY65 449 aaPredicted RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 PCTPQ9UKL6 214 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 TBX1O43435 398 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 LDB2O43679 373 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 SOCS5O75159 536 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 KLK1P06870 262 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 GABRB3P28472 473 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 LY6G5CQ5SRR4 150 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 C17orf99Q6UX52 265 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 DPY19L3Q6ZPD9 716 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 CMTR2Q8IYT2 770 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 SMYD1Q8NB12 490 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 HSH2DQ96JZ2 352 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ART5Q96L15 291 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ABCB9Q9NP78 766 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 EVPLQ92817 2033 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 AP2A2O94973 939 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 TYRP14679 529 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 RPL4P36578 427 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 FAM131AQ6UXB0 335 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 FAM92BQ6ZTR7 304 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 PIANPQ8IYJ0 282 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 FAM110BQ8TC76 370 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 KAT2AQ92830 837 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ZBED6CLQ96FA7 236 aaPredicted RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 CMTM7Q96FZ5 175 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 POLR2J3Q9H1A7 115 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ZNF696Q9H7X3 374 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 SDR39U1Q9NRG7 319 aaPredicted RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 MAT2BQ9NZL9 334 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 CFAP20Q9Y6A4 193 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 USP3Q9Y6I4 520 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 UPK3BL1B0FP48 263 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 UPK3BL2E5RIL1 263 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 PDPK1O15530 556 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 EEDO75530 441 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 PTX3P26022 381 aaPredicted RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 VIPR1P32241 457 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ERVPABLB-1P60509 514 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 TIGD6Q17RP2 521 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 HLA-DQA1Q5Y7H0 255 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 PARGQ86W56 976 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 ISOC1Q96CN7 298 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 COL21A1Q96P44 957 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 PKP4Q99569 1192 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 THUMPD1Q9NXG2 353 aaKnown RBP15.9■□□□□ 0.14
SCAF1-201ENST00000360565 TVP23BQ9NYZ1 205 aa15.9■□□□□ 0.14
SCAF1-201ENST00000360565 SCN9AQ15858 1988 aa15.89■□□□□ 0.14
SCAF1-201ENST00000360565 NUMA1Q14980 2115 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 HMX2A2RU54 273 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 SLC31A1O15431 190 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 ABCB7O75027 752 aa15.89■□□□□ 0.13
SCAF1-201ENST00000360565 POP7O75817 140 aaKnown RBP15.89■□□□□ 0.13
SCAF1-201ENST00000360565 HSD17B1P14061 328 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms