RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 RECQL5O94762 991 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 WDR47O94967 919 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 OXSR1O95747 527 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HIST1H2AGP0C0S8 130 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 EBLN1P0CF75 366 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 EPB42P16452 691 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HIST1H2ADP20671 130 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HNMTP50135 292 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HSPA14Q0VDF9 509 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 BCL2A1Q16548 175 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 UBE2R2Q712K3 238 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 IQCF2Q8IXL9 164 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TRIML2Q8N7C3 387 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TSPAN14Q8NG11 270 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 OR9I1Q8NGQ6 314 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 CXorf40AQ8TE69 158 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 ASZ1Q8WWH4 475 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 GLYATL1Q969I3 302 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HIST1H2AHQ96KK5 128 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 COQ10AQ96MF6 247 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HIST1H2AJQ99878 128 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 H2AFJQ9BTM1 129 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 GIMAP2Q9UG22 337 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TRPS1Q9UHF7 1281 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 CYP8B1Q9UNU6 501 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 AP4S1Q9Y587 144 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 LZTS3O60299 673 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 HMOX2P30519 316 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 MAT2AP31153 395 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 SMU1Q2TAY7 513 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TMEM52BQ4KMG9 183 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 ATP6AP1LQ52LC2 224 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 C8orf82Q6P1X6 216 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 Q6ZNX1 250 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 ZNF765Q7L2R6 523 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 CHERPQ8IWX8 916 aaKnown RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 SPEM1Q8N4L4 309 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 AP2M1Q96CW1 435 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 CDK15Q96Q40 435 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 SLC32A1Q9H598 525 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TBCCD1Q9NVR7 557 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 ARL15Q9NXU5 204 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 CEPT1Q9Y6K0 416 aa13.46□□□□□ -0.25
CSNK1E-201ENST00000359867 TBC1D3DA0A087WVF3 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3IA0A087WXS9 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3EA0A087X179 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3KA0A087X1G2 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 PABPN1LA6NDY0 278 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3FA6NER0 549 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3LB9A6J9 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 PLRG1O43660 514 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 SLCO2B1O94956 709 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3HP0C7X1 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 CKMT2P17540 419 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 CYP2A7P20853 494 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 AP1S2P56377 157 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 NME5P56597 212 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 C6orf136Q5SQH8 315 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3GQ6DHY5 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3CQ6IPX1 549 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 IL27RAQ6UWB1 636 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 Q6ZSR9 355 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 LRRC70Q7Z2Q7 622 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 RASGRP3Q8IV61 690 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TBC1D3Q8IZP1 549 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 SDR16C5Q8N3Y7 309 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 OR2T11Q8NH01 316 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 ELMO1Q92556 727 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 DTD2Q96FN9 168 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 EPHX3Q9H6B9 360 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 MBD1Q9UIS9 605 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 SCML1Q9UN30 329 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 ZFR2Q9UPR6 939 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 NCKAP1Q9Y2A7 1128 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 FAM32AQ9Y421 112 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 PRORSD1PA6NEY8 169 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF839A8K0R7 811 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TIPRLO75663 272 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 NR1H2P55055 460 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 PPP2CBP62714 309 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 PPP2CAP67775 309 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 BOP1Q14137 746 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 BLOC1S3Q6QNY0 202 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 MCOLN3Q8TDD5 553 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 FAM131CQ96AQ9 280 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 SLCO4A1Q96BD0 722 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 PPWD1Q96BP3 646 aaKnown RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 HOPXQ9BPY8 73 aaPredicted RBP13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 CENPOQ9BU64 300 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC29A3Q9BZD2 475 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 IL1RL2Q9HB29 575 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms