RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZNF358Q9NW07 568 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 ABCD2Q9UBJ2 740 aa15.69■□□□□ 0.1
COL18A1-203ENST00000359759 C14orf166Q9Y224 244 aaKnown RBP15.69■□□□□ 0.1
COL18A1-203ENST00000359759 UBXN7O94888 489 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 PLGP00747 810 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-203ENST00000359759 TACSTD2P09758 323 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 CXCR1P25024 350 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 PTGIRP43119 386 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SH3D19Q5HYK7 790 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 DTX3Q8N9I9 347 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 OR5T2Q8NGG2 359 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SLC25A51Q9H1U9 297 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 ARHGEF4Q9NR80 690 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 ITGA5P08648 1049 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 HMGCS1Q01581 520 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 AMZ1Q400G9 498 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 TAC4Q86UU9 113 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 NFKBIDQ8NI38 313 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 DQX1Q8TE96 717 aaKnown RBP15.68■□□□□ 0.1
COL18A1-203ENST00000359759 COL21A1Q96P44 957 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 UCK2Q9BZX2 261 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 TNFRSF10DQ9UBN6 386 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SETBP1Q9Y6X0 1596 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 LOC100130705A0A1B0GUX0 176 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 ARPC2O15144 300 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 CYP17A1P05093 508 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 CBLP22681 906 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 S100A12P80511 92 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 MOB2Q70IA6 237 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 BANPQ8N9N5 519 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 NKX1-2Q9UD57 310 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SALL4Q9UJQ4 1053 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 PCDHGB5Q9Y5G0 923 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 GADD45AP24522 165 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 RIN1Q13671 783 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 MAD2L1BPQ15013 274 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-203ENST00000359759 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SH3PXD2AQ5TCZ1 1133 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 COMTD1Q86VU5 262 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 C10orf82Q8WW14 230 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 ADAM7Q9H2U9 754 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 ZC3H13Q5T200 1668 aaKnown RBP15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SOX14O95416 240 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 HOXC6P09630 235 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 GLUD2P49448 558 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 CAPZA1P52907 286 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 TMEM236Q5W0B7 351 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 TUBA3EQ6PEY2 450 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 OR2AG1Q9H205 316 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 SMURF2Q9HAU4 748 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 HMGXB4Q9UGU5 601 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 LGALS13Q9UHV8 139 aa15.68■□□□□ 0.1
COL18A1-203ENST00000359759 DIP2AQ14689 1571 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 DNAJA1P31689 397 aaKnown RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 CD47Q08722 323 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 VTCN1Q7Z7D3 282 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 CLEC4CQ8WTT0 213 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF649Q9BS31 505 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 RUVBL1Q9Y265 456 aaKnown RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 PADI2Q9Y2J8 665 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 HCKP08631 526 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 ITGB5P18084 799 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 C1orf94Q6P1W5 598 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 HAGHLQ6PII5 290 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 CERS6Q6ZMG9 384 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 SLC15A3Q8IY34 581 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 TRPM4Q8TD43 1214 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 NEMP2A6NFY4 417 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 TMEM233B4DJY2 109 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 CSTBP04080 98 aaKnown RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 FOXN2P32314 431 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 TAF1AQ15573 450 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 AADACL4Q5VUY2 407 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 PHTF2Q8N3S3 785 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 ZNF565Q8N9K5 539 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 LRRC58Q96CX6 371 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 DERAQ9Y315 318 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 PVALBP20472 110 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 MAB21L1Q13394 359 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 ALG10Q5BKT4 473 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 VITQ6UXI7 678 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 HSDL2Q6YN16 418 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 PRR23BQ6ZRT6 265 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 CANT1Q8WVQ1 401 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 TLE6Q9H808 572 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 PPM1HQ9ULR3 514 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 SMIM28A0A1B0GU29 152 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 KLK1P06870 262 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 SLC7A1P30825 629 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 LAPTM4AQ15012 233 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 MTFR2Q6P444 385 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 SLC2A7Q6PXP3 512 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 ARSKQ6UWY0 536 aa15.67■□□□□ 0.1
COL18A1-203ENST00000359759 FAM43BQ6ZT52 329 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 ARL14EPQ8N8R7 260 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-203ENST00000359759 TEX13DA0A0J9YY54 714 aaPredicted RBP15.66■□□□□ 0.1
COL18A1-203ENST00000359759 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
COL18A1-203ENST00000359759 PRNPP04156 253 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms