RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 PLXNA4Q9HCM2 1894 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 LOC730098B7Z3J9 87 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 KRT75O95678 551 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 C9P02748 559 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 CTSHP09668 335 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 GDF5P43026 501 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 SLC14A1Q13336 389 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 NFE2Q16621 373 aaPredicted RBP23.06■■□□□ 1.28
NPAS3-203ENST00000357798 FBXO43Q4G163 708 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 ERICH5Q6P6B1 374 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 EIF3MQ7L2H7 374 aaKnown RBP23.06■■□□□ 1.28
NPAS3-203ENST00000357798 FKBP14Q9NWM8 211 aa23.06■■□□□ 1.28
NPAS3-203ENST00000357798 TRPM7Q96QT4 1865 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 PNMA8CA0A1B0GUJ8 204 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 KDELR3O43731 214 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 IDH3BO43837 385 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 VMACQ2NL98 169 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 PTRHD1Q6GMV3 140 aaKnown RBP23.05■■□□□ 1.28
NPAS3-203ENST00000357798 CFAP52Q8N1V2 620 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 BEND7Q8N7W2 519 aaPredicted RBP23.05■■□□□ 1.28
NPAS3-203ENST00000357798 PCDHGC4Q9Y5F7 938 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 RFXANKO14593 260 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 KMOO15229 486 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 KRT6AP02538 564 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 KRT6BP04259 564 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 CDK1P06493 297 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 PCSK2P16519 638 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 KDELR2P33947 212 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 KRT6CP48668 564 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 CBLL1Q75N03 491 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 ZZZ3Q8IYH5 903 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 HSH2DQ96JZ2 352 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 SPON2Q9BUD6 331 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 ACPTQ9BZG2 426 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 GPRC5BQ9NZH0 403 aa23.05■■□□□ 1.28
NPAS3-203ENST00000357798 RPS3P23396 243 aaKnown RBP eCLIP23.04■■□□□ 1.28
NPAS3-203ENST00000357798 GRK4P32298 578 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 MAGEA11P43364 429 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 INO80DQ53TQ3 878 aaPredicted RBP23.04■■□□□ 1.28
NPAS3-203ENST00000357798 ZCCHC8Q6NZY4 707 aaKnown RBP23.04■■□□□ 1.28
NPAS3-203ENST00000357798 CERS6Q6ZMG9 384 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 NELL1Q92832 810 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 MIR1-1HGQ9H1L0 117 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 ZNF221Q9UK13 617 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 PPT2Q9UMR5 302 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 LOC110117498-PIK3R3F6TDL0 507 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 F11P03951 625 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 EPB42P16452 691 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 MAGP20916 626 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 LIMK1P53667 647 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 PURAQ00577 322 aaKnown RBP23.04■■□□□ 1.28
NPAS3-203ENST00000357798 LDLRAD1Q5T700 205 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 SPRYD7Q5W111 196 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 PRR23CQ6ZRP0 262 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 VTCN1Q7Z7D3 282 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 DNAJC22Q8N4W6 341 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 PIK3R3Q92569 461 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 HHIPQ96QV1 700 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 EPYCQ99645 322 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 APOL5Q9BWW9 433 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 CIPCQ9C0C6 399 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 RETREG1Q9H6L5 497 aa23.04■■□□□ 1.28
NPAS3-203ENST00000357798 CCDC177Q9NQR7 707 aaPredicted RBP23.04■■□□□ 1.28
NPAS3-203ENST00000357798 TLR8Q9NR97 1041 aaKnown RBP23.04■■□□□ 1.28
NPAS3-203ENST00000357798 DGKAP23743 735 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 C21orf33P30042 268 aaPredicted RBP23.03■■□□□ 1.28
NPAS3-203ENST00000357798 GRK5P34947 590 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 ZNF544Q6NX49 715 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 RAD9AQ99638 391 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 CLPBQ9H078 707 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 FBXL12Q9NXK8 326 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 QPCTLQ9NXS2 382 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 CENPBD1B2RD01 187 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 GPR39O43194 453 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 ZW10O43264 779 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 SLC19A1P41440 591 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 CPA6Q8N4T0 437 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 CELF2-AS1Q8N7Q2 184 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 SLC10A4Q96EP9 437 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 SNX18Q96RF0 628 aa23.03■■□□□ 1.28
NPAS3-203ENST00000357798 B3GALT4O96024 378 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 GGT2P36268 569 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 PXNP49023 591 aaPredicted RBP23.02■■□□□ 1.28
NPAS3-203ENST00000357798 UGT2B15P54855 530 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 ZNF675Q8TD23 568 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 NUAK2Q9H093 628 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 EHD3Q9NZN3 535 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 CLCA1A8K7I4 914 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 OAZ2O95190 189 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 ZNF7P17097 686 aaPredicted RBP23.02■■□□□ 1.28
NPAS3-203ENST00000357798 ITGB6P18564 788 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 MAPK1P28482 360 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 NEK2P51955 445 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 ABRQ12979 859 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 GGHQ92820 318 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 TSSK3Q96PN8 268 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 IL17CQ9P0M4 197 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 PCDHB5Q9Y5E4 795 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 LYVE1Q9Y5Y7 322 aa23.02■■□□□ 1.28
NPAS3-203ENST00000357798 KCNK5O95279 499 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms