RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CKBP12277 381 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 ATF6P18850 670 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 CST5P28325 142 aaPredicted RBP17.22■□□□□ 0.35
RTN4-204ENST00000357732 KIR3DL1P43629 444 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 FLT3LGP49771 235 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 GPR162Q16538 588 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 DUOXA1Q1HG43 343 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 ZNF181Q2M3W8 571 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 CYP2U1Q7Z449 544 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 C10orf111Q8N326 155 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 L3MBTL4Q8NA19 623 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.358e-30■■□□□ 13.3
RTN4-204ENST00000357732 ZHX1-C8orf76Q96EF9 292 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 EPYCQ99645 322 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 INPP5KQ9BT40 448 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 BOCQ9BWV1 1114 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 GABARAPL3Q9BY60 117 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 ELOVL6Q9H5J4 265 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 REEP1Q9H902 201 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 RRAGCQ9HB90 399 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 PLCXD1Q9NUJ7 323 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 TMEM161AQ9NX61 479 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 STOML2Q9UJZ1 356 aa17.22■□□□□ 0.35
RTN4-204ENST00000357732 ZNF840PA6NDX5 716 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 FADS2O95864 444 aaKnown RBP17.21■□□□□ 0.35
RTN4-204ENST00000357732 KLKB1P03952 638 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 SDC1P18827 310 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 HOXA9P31269 272 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 KDELR2P33947 212 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 HOXD12P35452 270 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 TGFBR2P37173 567 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 EIF2DP41214 584 aaKnown RBP17.21■□□□□ 0.35
RTN4-204ENST00000357732 PXNP49023 591 aaPredicted RBP17.21■□□□□ 0.35
RTN4-204ENST00000357732 HNMTP50135 292 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 SGSHP51688 502 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 C21orf58P58505 322 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 TEKQ02763 1124 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 ARHGEF7Q14155 803 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 CCDC92Q53HC0 331 aaPredicted RBP17.21■□□□□ 0.35
RTN4-204ENST00000357732 NEK5Q6P3R8 708 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 CCDC81Q6ZN84 652 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 ARMC8Q8IUR7 673 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 STARD8Q92502 1023 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 PDP1Q9P0J1 537 aaPredicted RBP17.21■□□□□ 0.35
RTN4-204ENST00000357732 TSR3Q9UJK0 312 aaKnown RBP17.21■□□□□ 0.35
RTN4-204ENST00000357732 SCN8AQ9UQD0 1980 aa17.21■□□□□ 0.35
RTN4-204ENST00000357732 KCNE1BA0A087WTH5 132 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 GLYATL1P3A0A0U1RQE8 302 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 AGAP14A8MT82 685 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 EFCAB9A8MZ26 197 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 AXIN1O15169 862 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 COCHO43405 550 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 TRBC1P01850 177 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 CD36P16671 472 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 NCS1P62166 190 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 ELP6Q0PNE2 266 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 TBCEQ15813 527 aaPredicted RBP17.21■□□□□ 0.34
RTN4-204ENST00000357732 GPR155Q7Z3F1 870 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 ZZZ3Q8IYH5 903 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 HRASLS5Q96KN8 279 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 IL26Q9NPH9 171 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 FAM120CQ9NX05 1096 aaKnown RBP17.21■□□□□ 0.34
RTN4-204ENST00000357732 HCSTQ9UBK5 93 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 CRLS1Q9UJA2 301 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 PPT2Q9UMR5 302 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 SAMHD1Q9Y3Z3 626 aaKnown RBP17.21■□□□□ 0.34
RTN4-204ENST00000357732 PRSS21Q9Y6M0 314 aa17.21■□□□□ 0.34
RTN4-204ENST00000357732 MN1Q10571 1320 aaPredicted RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 MYO1GB0I1T2 1018 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 CLIC1O00299 241 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 SOCS5O75159 536 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 UPK1BO75841 260 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 EPN2O95208 641 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 PRAMEF12O95522 483 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 C9P02748 559 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 GSNP06396 782 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 ITGB6P18564 788 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 EPORP19235 508 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 SERPINB1P30740 379 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 KRT20P35900 424 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 NSG1P42857 185 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 CSNK1DP48730 415 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 TUFMP49411 452 aaKnown RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 NPRL3Q12980 569 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 CPSF6Q16630 551 aaKnown RBP eCLIP17.2■□□□□ 0.341e-10■□□□□ 11.3
RTN4-204ENST00000357732 ZNF404Q494X3 552 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 NAT16Q8N8M0 369 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 MCFD2Q8NI22 146 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 METTL2AQ96IZ6 378 aaKnown RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 ELAC1Q9H777 363 aaKnown RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 KIAA1522Q9P206 1035 aaPredicted RBP17.2■□□□□ 0.34
RTN4-204ENST00000357732 KCNK5O95279 499 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 GJB5O95377 273 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 C8GP07360 202 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 FSHRP23945 695 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 SPAM1P38567 509 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 CDKN2CP42773 168 aa17.2■□□□□ 0.34
RTN4-204ENST00000357732 RPIAP49247 311 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms