RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FAM214AQ32MH5 1076 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 COLEC12Q5KU26 742 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PTRHD1Q6GMV3 140 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 LAIR2Q6ISS4 152 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CES5AQ6NT32 575 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATG16L2Q8NAA4 619 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAR1Q8WVX9 515 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ISG20Q96AZ6 181 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZHX1-C8orf76Q96EF9 292 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 REXO4Q9GZR2 422 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 NECTIN3Q9NQS3 549 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SCN3BQ9NY72 215 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GMPPBQ9Y5P6 360 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MN1Q10571 1320 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PDE4DIPQ5VU43 2346 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 KRT87PA6NCN2 255 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 TNFRSF10BO14763 440 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CPNE3O75131 537 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MT-ND2P03891 347 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CYP11A1P05108 521 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 LCKP06239 509 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 EPHA2P29317 976 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 HTR7P34969 479 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 DDOSTP39656 456 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR1G1P47890 313 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CPT1AP50416 773 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SUOXP51687 545 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 KCNQ1P51787 676 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARHGDIAP52565 204 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CYP4F2P78329 520 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 EPS8Q12929 822 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GRIK2Q13002 908 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 EIF4EBP2Q13542 120 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SPATS1Q496A3 300 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 Q5BKY6 102 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SYCE2Q6PIF2 218 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GDPD3Q7L5L3 318 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZDHHC21Q8IVQ6 265 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SYTL1Q8IYJ3 562 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 C10orf111Q8N326 155 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF548Q8NEK5 533 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MCFD2Q8NI22 146 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CD200R1Q8TD46 325 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SH3KBP1Q96B97 665 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ST6GAL2Q96JF0 529 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ADAM2Q99965 735 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 BCL7BQ9BQE9 202 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 LIN7BQ9HAP6 207 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PRDM5Q9NQX1 630 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ACOXLQ9NUZ1 547 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 WWOXQ9NZC7 414 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 INTS6Q9UL03 887 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF490Q9ULM2 529 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MIA3Q5JRA6 1907 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 WDR90Q96KV7 1748 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 STX16O14662 325 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 TSPAN4O14817 238 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PER2O15055 1255 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARHGEF9O43307 516 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 NBNO60934 754 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ULK1O75385 1050 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SERPINI2O75830 405 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 DNAJB5O75953 348 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GABARAPO95166 117 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PGLSO95336 258 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CD36P16671 472 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CTPS1P17812 591 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ALOX12P18054 663 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATF6P18850 670 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GTF2E2P29084 291 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SRP54P61011 504 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 RPS24P62847 133 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 RHAGQ02094 409 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 TAF10Q12962 218 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ARHGEF7Q14155 803 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CACHD1Q5VU97 1274 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SHEQ5VZ18 495 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MBOAT1Q6ZNC8 495 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 NOXA1Q86UR1 476 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 METTL4Q8N3J2 472 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 GPR150Q8NGU9 434 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR6K2Q8NGY2 324 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR5K1Q8NHB7 308 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 C1orf74Q96LT6 269 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF382Q96SR6 550 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 POPDC3Q9HBV1 291 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZBTB20Q9HC78 741 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 IL20Q9NYY1 176 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC25A37Q9NYZ2 338 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PADI3Q9ULW8 664 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 SCN4AP35499 1836 aa8.02□□□□□ -1.13
CDC42SE1-201ENST00000357235 BET1O15155 118 aa8.02□□□□□ -1.13
CDC42SE1-201ENST00000357235 FFAR2O15552 330 aa8.02□□□□□ -1.13
CDC42SE1-201ENST00000357235 SH3BGRLO75368 114 aa8.02□□□□□ -1.13
CDC42SE1-201ENST00000357235 TSPAN12O95859 305 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms