RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 NIPSNAP2O75323 286 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 VPS26AO75436 327 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CBX6O95503 412 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 PKMP14618 531 aaKnown RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 TPSB2P20231 275 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 BDKRB1P46663 353 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ADARP55265 1226 aaKnown RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 FOXL2P58012 376 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 THOC5Q13769 683 aaKnown RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 SIX1Q15475 284 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 TPSAB1Q15661 275 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 MUM1Q2TAK8 710 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 TTLL9Q3SXZ7 439 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CCSMST1Q4G0I0 132 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ARMC3Q5W041 872 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 KIRREL2Q6UWL6 708 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CES3Q6UWW8 571 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 Q6ZS92 163 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 OR2A1Q8NGT9 310 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 OR9A1PQ8NGU1 263 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 DNAJB14Q8TBM8 379 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 RERGQ96A58 199 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 FAM136AQ96C01 138 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 MIEF2Q96C03 454 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 MFSD3Q96ES6 412 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 THOC3Q96J01 351 aaKnown RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CABS1Q96KC9 395 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 DPH7Q9BTV6 452 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CRB3Q9BUF7 120 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ACAT2Q9BWD1 397 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 LHPPQ9H008 270 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CCDC68Q9H2F9 335 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 EPS8L2Q9H6S3 715 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 MRPS30Q9NP92 439 aaKnown RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 SPATA7Q9P0W8 599 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ZNF282Q9UDV7 671 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 SOX13Q9UN79 622 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 RUVBL2Q9Y230 463 aaKnown RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 HS3ST3B1Q9Y662 390 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ESPL1Q14674 2120 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 NAV2Q8IVL1 2488 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 SDR42E2A6NKP2 422 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 SOCS6O14544 535 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 PHF2O75151 1096 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 CCNDBP1O95273 360 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 MATN4O95460 622 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 CATP04040 527 aaKnown RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 UQCRHP07919 91 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 OGNP20774 298 aaKnown RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 FBLP22087 321 aaKnown RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 CXCR2P25025 360 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 PSMB5P28074 263 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ATP5DP30049 168 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 CXCR5P32302 372 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 GCGRP47871 477 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 VPS41P49754 854 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 GPS1Q13098 491 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ARHGAP19Q14CB8 494 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 TRIP13Q15645 432 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 HIF1AQ16665 826 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 TYSND1Q2T9J0 566 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 KLHL38Q2WGJ6 581 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 CTSL3PQ5NE16 218 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 FRMPD2BQ6IN97 320 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 NEPROQ6NW34 567 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 FBXO42Q6P3S6 717 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ZNF662Q6ZS27 426 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 SMPDL3AQ92484 453 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 LPGAT1Q92604 370 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 C5orf34Q96MH7 638 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ZNF285Q96NJ3 590 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 BIRC8Q96P09 236 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 SPSB2Q99619 263 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ZFYVE21Q9BQ24 234 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 WDR77Q9BQA1 342 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ZBTB20Q9HC78 741 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 ENAMQ9NRM1 1142 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 INTS10Q9NVR2 710 aaKnown RBP10.18□□□□□ -0.78
CAPN3-204ENST00000356316 CTSFQ9UBX1 484 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 SLC5A6Q9Y289 635 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 KLK4Q9Y5K2 254 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 SHANK1Q9Y566 2161 aa10.18□□□□□ -0.78
CAPN3-204ENST00000356316 LOC105369274A0A096LPK9 316 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 LOC102723532A0A0G2JNH3 316 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 A1L4Q6 167 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 VSTM2BA6NLU5 285 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 H0YGG7 62 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 TXNDC9O14530 226 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 MAP2K7O14733 419 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 ZBTB14O43829 449 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 AVILO75366 819 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 USP1O94782 785 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 SYF2O95926 243 aaKnown RBP10.17□□□□□ -0.78
CAPN3-204ENST00000356316 KRT14P02533 472 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 ANXA5P08758 320 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 ZGLP1P0C6A0 271 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 ACPPP15309 386 aa10.17□□□□□ -0.78
CAPN3-204ENST00000356316 PNLIPRP1P54315 467 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms