RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 P2RY13Q9BPV8 354 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 LRRN3Q9H3W5 708 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 SFXN1Q9H9B4 322 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 IL21Q9HBE4 155 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 SH3BP4Q9P0V3 963 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 IGSF9Q9P2J2 1179 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 ERVK-18Q9QC07 812 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 MTRRQ9UBK8 725 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 LRFN2Q9ULH4 789 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 SNX6Q9UNH7 406 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 PCDHB9Q9Y5E1 797 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 NPIPB15A6NHN6 443 aaPredicted RBP5.45□□□□□ -1.54
CD47-201ENST00000355354 PRR32B1ATL7 298 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 PRMT5O14744 637 aaPredicted RBP5.45□□□□□ -1.54
CD47-201ENST00000355354 NPC1O15118 1278 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 ARPC2O15144 300 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 TEX28O15482 410 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 IRAK2O43187 625 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 ECI2O75521 394 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 SRFP11831 508 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 CD1DP15813 335 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 SOX3P41225 446 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 CTSCP53634 463 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 E2F1Q01094 437 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 RELAQ04206 551 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 TRAF1Q13077 416 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 ORC2Q13416 577 aaPredicted RBP5.45□□□□□ -1.54
CD47-201ENST00000355354 TPRG1LQ5T0D9 272 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 HECTD2Q5U5R9 776 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 MYO19Q96H55 970 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 FUNDC2Q9BWH2 189 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 ZCCHC4Q9H5U6 513 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 ZFYVE1Q9HBF4 777 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 AGPAT4Q9NRZ5 378 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 CLDND1Q9NY35 253 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 IL37Q9NZH6 218 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 FBXO4Q9UKT5 387 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 HRH3Q9Y5N1 445 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 OR51B4Q9Y5P0 310 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 BACE2Q9Y5Z0 518 aa5.45□□□□□ -1.54
CD47-201ENST00000355354 A0A0J9YYE9 177 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 DRGXA6NNA5 263 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PER2O15055 1255 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 CHADO15335 359 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TGM5O43548 720 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TRIM13O60858 407 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 OPHN1O60890 802 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 NTRK1P04629 796 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 NEFHP12036 1026 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 SPINK2P20155 84 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 HALP42357 657 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 FLOT2Q14254 428 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 CSRP2Q16527 193 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 GXYLT1Q4G148 440 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 REP15Q6BDI9 236 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TMEM91Q6ZNR0 172 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 USP51Q70EK9 711 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PTOV1Q86YD1 416 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 ZNF547Q8IVP9 402 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 CMTM8Q8IZV2 173 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PTGR2Q8N8N7 351 aaPredicted RBP5.44□□□□□ -1.54
CD47-201ENST00000355354 SMYD1Q8NB12 490 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 OR5AK3PQ8NH89 298 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 BAHD1Q8TBE0 780 aaPredicted RBP5.44□□□□□ -1.54
CD47-201ENST00000355354 MPHOSPH6Q99547 160 aaKnown RBP5.44□□□□□ -1.54
CD47-201ENST00000355354 ACAT2Q9BWD1 397 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 LGR4Q9BXB1 951 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TTTY10Q9BZA0 68 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 CSNK1G1Q9HCP0 422 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 KCNK4Q9NYG8 393 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 MAFFQ9ULX9 164 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 NPEPPSL1A6NEC2 478 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 G3V3Q6 166 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TRMUO75648 421 aaKnown RBP5.44□□□□□ -1.54
CD47-201ENST00000355354 ALPLP05186 524 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PSKH1P11801 424 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 IGFBP4P22692 258 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 KCNK10P57789 538 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 C2orf27AQ580R0 203 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 SPARTQ8N0X7 666 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 MARVELD2Q8N4S9 558 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 DTWD2Q8NBA8 298 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD47-201ENST00000355354 MCUR1Q96AQ8 359 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 ART5Q96L15 291 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 HCAR1Q9BXC0 346 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 SUV39H2Q9H5I1 410 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 POLR1BQ9H9Y6 1135 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TRAF6Q9Y4K3 522 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 IQANK1A0A1B0GTG1 560 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 A8MUA0 341 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PTHP01270 115 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 CAPN1P07384 714 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PRR35P0CG20 571 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 LAMP2P13473 410 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 TRAF3Q13114 568 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 RAB33AQ14088 237 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 SEC23BQ15437 767 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 PARP15Q460N3 678 aa5.44□□□□□ -1.54
CD47-201ENST00000355354 DCDC5Q6ZRR9 648 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms