RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PRKCQQ04759 706 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 PWP1Q13610 501 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 NFATC4Q14934 902 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 CAMKMTQ7Z624 323 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 FAM129CQ86XR2 697 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 CHTF18Q8WVB6 975 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 SLC5A11Q8WWX8 675 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 NEIL2Q969S2 332 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 UBE2E3Q969T4 207 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 TRIT1Q9H3H1 467 aaKnown RBP16.65■□□□□ 0.26
VPS13B-201ENST00000355155 MVB12BQ9H7P6 319 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 DUSP12Q9UNI6 340 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 OR1A2Q9Y585 309 aa16.65■□□□□ 0.26
VPS13B-201ENST00000355155 TRBV5-3A0A0A0MS03 114 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 TCRBV3S1A0A5B6 114 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 KRT87PA6NCN2 255 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 SEC22BO75396 215 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 ANP32DO95626 131 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 IGFBP4P22692 258 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 ARL1P40616 181 aaPredicted RBP16.64■□□□□ 0.25
VPS13B-201ENST00000355155 TPMTP51580 245 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 PUS10Q3MIT2 529 aaKnown RBP16.64■□□□□ 0.25
VPS13B-201ENST00000355155 PAGE2BQ5JRK9 111 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 MED27Q6P2C8 311 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 LIX1Q8N485 282 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 ABHD11Q8NFV4 315 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 OR4K1Q8NGD4 311 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 OR8J3Q8NGG0 315 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 ZBTB18Q99592 522 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 RAB11FIP5Q9BXF6 653 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 RHBGQ9H310 441 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 CMTM6Q9NX76 183 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 ZNHIT2Q9UHR6 403 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 RUVBL1Q9Y265 456 aaKnown RBP16.64■□□□□ 0.25
VPS13B-201ENST00000355155 KANSL1LA0AUZ9 987 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 NME4O00746 187 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 CHRNB1P11230 501 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 VHLP40337 213 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 PTDSS1P48651 473 aaKnown RBP16.64■□□□□ 0.25
VPS13B-201ENST00000355155 MLF2Q15773 248 aaPredicted RBP16.64■□□□□ 0.25
VPS13B-201ENST00000355155 DPY19L1Q2PZI1 675 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 LRIF1Q5T3J3 769 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 SWT1Q5T5J6 900 aaKnown RBP16.64■□□□□ 0.25
VPS13B-201ENST00000355155 SYT13Q7L8C5 426 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 OR7G3Q8NG95 312 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 VPS29Q9UBQ0 182 aa16.64■□□□□ 0.25
VPS13B-201ENST00000355155 LRRC72A6NJI9 287 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 NARSO43776 548 aaKnown RBP16.63■□□□□ 0.25
VPS13B-201ENST00000355155 HID1Q8IV36 788 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 OR5AR1Q8NGP9 310 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 PSMD13Q9UNM6 376 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 ASF1AQ9Y294 204 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 C15orf41Q9Y2V0 281 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 PLXND1Q9Y4D7 1925 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3DA0A087WVF3 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3IA0A087WXS9 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3EA0A087X179 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3KA0A087X1G2 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 PRSS51A0A1B0GVH4 220 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 A0A1W2PPV9 198 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3FA6NER0 549 aaPredicted RBP16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3LB9A6J9 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3HP0C7X1 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 ACADMP11310 421 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 SDC1P18827 310 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 HNRNPA2B1P22626 353 aaKnown RBP16.63■□□□□ 0.25
VPS13B-201ENST00000355155 PLA2G4EQ3MJ16 856 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 SPIN4Q56A73 249 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3GQ6DHY5 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3CQ6IPX1 549 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 LCN8Q6JVE9 175 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 DOK6Q6PKX4 331 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TBC1D3Q8IZP1 549 aaPredicted RBP16.63■□□□□ 0.25
VPS13B-201ENST00000355155 FAM174AQ8TBP5 190 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 GANCQ8TET4 914 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 NRG4Q8WWG1 115 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 STARD8Q92502 1023 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 APIPQ96GX9 242 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 DPY30Q9C005 99 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 TM7SF3Q9NS93 570 aa16.63■□□□□ 0.25
VPS13B-201ENST00000355155 C6orf203Q9P0P8 240 aaPredicted RBP16.63■□□□□ 0.25
VPS13B-201ENST00000355155 DGKEP52429 567 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 SLC7A2P52569 658 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 NME5P56597 212 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 FLOT2Q14254 428 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 PRAMEF14Q5SWL7 426 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 PRAMEF13Q5VWM6 474 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 NOXRED1Q6NXP6 359 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 ABRAXAS1Q6UWZ7 409 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 RNF111Q6ZNA4 994 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 LRRC74BQ6ZQY2 392 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 TMEM145Q8NBT3 493 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 GTF2H4Q92759 462 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 MED8Q96G25 268 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 BMFQ96LC9 184 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 OSBPL6Q9BZF3 934 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 GEMIN8Q9NWZ8 242 aaKnown RBP16.62■□□□□ 0.25
VPS13B-201ENST00000355155 SUFUQ9UMX1 484 aa16.62■□□□□ 0.25
VPS13B-201ENST00000355155 DLGAP4Q9Y2H0 992 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms