RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 RUNDC3AQ59EK9 446 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 C10orf62Q5T681 223 aaPredicted RBP7.65□□□□□ -1.18
CD46-203ENST00000354848 SHEQ5VZ18 495 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 GPR153Q6NV75 609 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 BRAT1Q6PJG6 821 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 PLET1Q6UQ28 207 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 TEX261Q6UWH6 196 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 ARSKQ6UWY0 536 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 FAM131AQ6UXB0 335 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 GLCCI1Q86VQ1 547 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 KIF18BQ86Y91 864 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 NIM1KQ8IY84 436 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 FAM181AQ8N9Y4 354 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 TRAPPC12Q8WVT3 735 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 ESAMQ96AP7 390 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 CNPPD1Q9BV87 410 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 CXCL16Q9H2A7 254 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 IL1RAPQ9NPH3 570 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 MCUBQ9NWR8 336 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 ZNF224Q9NZL3 707 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 ZNF70Q9UC06 446 aaPredicted RBP7.65□□□□□ -1.18
CD46-203ENST00000354848 OR12D3Q9UGF7 316 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 FBXW11Q9UKB1 542 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 RNF112Q9ULX5 631 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 TNPO3Q9Y5L0 923 aaKnown RBP7.65□□□□□ -1.18
CD46-203ENST00000354848 U3KQ87 197 aa7.65□□□□□ -1.18
CD46-203ENST00000354848 FAM220BPB1ANY3 271 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 H3BM21 787 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 PER2O15055 1255 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 CA12O43570 354 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 SERPINI2O75830 405 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ZNF682O95780 498 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 HLA-DQB2P05538 268 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 SLC10A3P09131 477 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 CNPP09543 421 aaKnown RBP7.65□□□□□ -1.19
CD46-203ENST00000354848 CCNCP24863 283 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ICAM3P32942 547 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 TGM4P49221 684 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ETV1P50549 477 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 TEKQ02763 1124 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ST3GAL4Q11206 333 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 MAB21L1Q13394 359 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 RIN1Q13671 783 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.65□□□□□ -1.199e-8■□□□□ 11.1
CD46-203ENST00000354848 FAM174BQ3ZCQ3 159 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 RFTN2Q52LD8 501 aaPredicted RBP7.65□□□□□ -1.19
CD46-203ENST00000354848 KDELC1Q6UW63 502 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ZNF782Q6ZMW2 699 aaPredicted RBP7.65□□□□□ -1.19
CD46-203ENST00000354848 ZSWIM9Q86XI8 627 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 ZNF680Q8NEM1 530 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 VANGL1Q8TAA9 524 aaPredicted RBP7.65□□□□□ -1.19
CD46-203ENST00000354848 STAG3L4Q8TBR4 150 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 TESCQ96BS2 214 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 CRELD1Q96HD1 420 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 HYLS1Q96M11 299 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 CDK15Q96Q40 435 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 SLC2A13Q96QE2 648 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 SPNS1Q9H2V7 528 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 RAD18Q9NS91 495 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 SLC6A13Q9NSD5 602 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 C1orf109Q9NX04 203 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 PCTPQ9UKL6 214 aa7.65□□□□□ -1.19
CD46-203ENST00000354848 SAMHD1Q9Y3Z3 626 aaKnown RBP7.65□□□□□ -1.19
CD46-203ENST00000354848 NYNRINQ9P2P1 1898 aaKnown RBP7.64□□□□□ -1.19
CD46-203ENST00000354848 NUP214P35658 2090 aaPredicted RBP7.64□□□□□ -1.19
CD46-203ENST00000354848 WASHC1A8K0Z3 465 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 GFRA2O00451 464 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 ECI2O75521 394 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 PDE9AO76083 593 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 HOXD4P09016 255 aaPredicted RBP7.64□□□□□ -1.19
CD46-203ENST00000354848 AKT1P31749 480 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 HMGCLP35914 325 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 HTR6P50406 440 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 GZMMP51124 257 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 CLCN3P51790 818 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 SMARCB1Q12824 385 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 PTGR1Q14914 329 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 MED22Q15528 200 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 TSNQ15631 228 aaKnown RBP7.64□□□□□ -1.19
CD46-203ENST00000354848 GRIK4Q16099 956 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 AANATQ16613 207 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 GARNL3Q5VVW2 1013 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 RGMBQ6NW40 437 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 FAHD1Q6P587 224 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 CALHM3Q86XJ0 350 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 KRT73Q86Y46 540 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 EFHBQ8N7U6 833 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 MARC2Q969Z3 335 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 KIAA1191Q96A73 305 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 FAM120BQ96EK7 910 aaKnown RBP7.64□□□□□ -1.19
CD46-203ENST00000354848 KCNC2Q96PR1 638 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 CAMKK2Q96RR4 588 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 MGLLQ99685 303 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 TMEM245Q9H330 911 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 MFSD1Q9H3U5 465 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 TRIM45Q9H8W5 580 aaPredicted RBP7.64□□□□□ -1.19
CD46-203ENST00000354848 ZNF304Q9HCX3 659 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 ZC4H2Q9NQZ6 224 aa7.64□□□□□ -1.19
CD46-203ENST00000354848 CMAHPQ9Y471 501 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms