RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 MYLK4Q86YV6 388 aaPredicted RBP19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 MINDY1Q8N5J2 469 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 CDYL2Q8N8U2 506 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 L3MBTL4Q8NA19 623 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 OR2A1Q8NGT9 310 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 OR4C6Q8NH72 309 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 ZNF473Q8WTR7 871 aaKnown RBP19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 SLC38A3Q99624 504 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 TWSG1Q9GZX9 223 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 KLHL14Q9P2G3 628 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 TRPS1Q9UHF7 1281 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 DCTN4Q9UJW0 460 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 SH2B3Q9UQQ2 575 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 TIMM22Q9Y584 194 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 VPS13AQ96RL7 3174 aa19.41■□□□□ 0.7
SIGMAR1-202ENST00000353468 PIPSLA2A3N6 862 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 OR6C74A6NCV1 312 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 ISM1B1AKI9 464 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 TRIM38O00635 465 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 NDUFAB1O14561 156 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 HDAC3O15379 428 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 PCDHGA12O60330 932 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 CAPN1P07384 714 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 DOC2AQ14183 400 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 UGT3A2Q3SY77 523 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 GGTA1PQ4G0N0 100 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 KANK2Q63ZY3 851 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 ICE2Q659A1 982 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 TMPRSS11BQ86T26 416 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 C17orf64Q86WR6 236 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 METTL6Q8TCB7 284 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 SLC22A18Q96BI1 424 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 MAGEB10Q96LZ2 347 aaPredicted RBP19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 LAMA1P25391 3075 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 ARID1BQ8NFD5 2236 aaPredicted RBP19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 LILRA5A6NI73 299 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 RHPN2P1A8MT19 583 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 ZNF195O14628 629 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 ALOX15P16050 662 aaPredicted RBP19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 POLR2CP19387 275 aaPredicted RBP19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 CASP2P42575 452 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 AQP5P55064 265 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 PRDX1Q06830 199 aaKnown RBP19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 E2F2Q14209 437 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 KIR2DS3Q14952 304 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 TBCCQ15814 346 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 CATSPEREQ5SY80 951 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 NXPE4Q6UWF7 544 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 OR10G6Q8NH81 332 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 ATOH1Q92858 354 aaPredicted RBP19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 SIKE1Q9BRV8 207 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 IRF2BPLQ9H1B7 796 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 EHD1Q9H4M9 534 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 KCNK13Q9HB14 408 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 LRIT1Q9P2V4 623 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 DNAJC15Q9Y5T4 150 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 RNF215Q9Y6U7 377 aa19.4■□□□□ 0.7
SIGMAR1-202ENST00000353468 RALGAPA1Q6GYQ0 2036 aa19.39■□□□□ 0.7
SIGMAR1-202ENST00000353468 KCNE1BA0A087WTH5 132 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 NUDT21O43809 227 aaKnown RBP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 ZNF806P0C7X5 589 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 C1GALT1C1LP0DN25 315 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 CDH1P12830 882 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 JUPP14923 745 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 GLB1P16278 677 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 CD22P20273 847 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 VARSP26640 1264 aaKnown RBP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 HMOX2P30519 316 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 YBX1P67809 324 aaKnown RBP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 TERF2Q15554 542 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 SF1Q15637 639 aaKnown RBP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 PDCD2Q16342 344 aaPredicted RBP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 CPSF6Q16630 551 aaKnown RBP eCLIP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 ATG9BQ674R7 924 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 MAVSQ7Z434 540 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 OOSP2Q86WS3 158 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 CHCHD4Q8N4Q1 142 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 WDR34Q96EX3 536 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 PTCD3Q96EY7 689 aaKnown RBP19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 NUF2Q9BZD4 464 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 HRASLS2Q9NWW9 162 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 ENTPD2Q9Y5L3 495 aa19.39■□□□□ 0.69
SIGMAR1-202ENST00000353468 A0A0G2JND7 137 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 LNP1A1A4G5 178 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 FFAR3O14843 346 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 HGSO14964 777 aaPredicted RBP19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 GPR42O15529 346 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 SIGLEC6O43699 453 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 SKAP2O75563 359 aaPredicted RBP19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 UBXN7O94888 489 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 CCNDBP1O95273 360 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 ZNF883P0CG24 379 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 AMD1P17707 334 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 HNF4AP41235 474 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 ABATP80404 500 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 GABPB1Q06547 395 aaPredicted RBP19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 GKAP1Q5VSY0 366 aaPredicted RBP19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 GRHL2Q6ISB3 625 aa19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 EFL1Q7Z2Z2 1120 aaKnown RBP19.38■□□□□ 0.69
SIGMAR1-202ENST00000353468 HOMEZQ8IX15 550 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms