RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 FCRL2Q96LA5 508 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CCDC115Q96NT0 180 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 COL21A1Q96P44 957 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SDHCQ99643 169 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 MGLLQ99685 303 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 AARSD1Q9BTE6 412 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SLC7A5P2Q9GIP4 190 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 FAM124BQ9H5Z6 455 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 NDRG4Q9ULP0 352 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 HCN4Q9Y3Q4 1203 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 COL1A2P08123 1366 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 NT5C1B-RDH14C9J2C7 533 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 TLR5O60602 858 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PDE9AO76083 593 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PRLP01236 227 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 COL2A1P02458 1487 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 RPS17P08708 135 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PRR35P0CG20 571 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 RENBPP51606 427 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SCAPQ12770 1279 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 TNFAIP1Q13829 316 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 TBCEQ15813 527 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PTCHD3Q3KNS1 767 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 C5orf22Q49AR2 442 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 C10orf62Q5T681 223 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 KDM4DQ6B0I6 523 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 ANGPTL8Q6UXH0 198 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 GET4Q7L5D6 327 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 ARHGAP12Q8IWW6 846 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 ESX1Q8N693 406 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SETD6Q8TBK2 473 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 ZFAND1Q8TCF1 268 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 TSSK3Q96PN8 268 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 OR5M11Q96RB7 305 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CYP2S1Q96SQ9 504 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 APOL5Q9BWW9 433 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SLC25A51Q9H1U9 297 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 MAGIXQ9H6Y5 334 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 RNF121Q9H920 327 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 AGO3Q9H9G7 860 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SLC25A37Q9NYZ2 338 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CLCA1A8K7I4 914 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 J3KR12 359 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PDPK1O15530 556 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 NIPSNAP2O75323 286 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 VPS26AO75436 327 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CPSF4O95639 269 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CDK1P06493 297 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 RETP07949 1114 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 HOXC5Q00444 222 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 ALDH6A1Q02252 535 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 NFE2L1Q14494 772 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 KCTD2Q14681 263 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 FXNQ16595 210 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 TRIQKQ629K1 86 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 OVOS1Q6IE37 1185 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 EIF3MQ7L2H7 374 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CCDC71Q8IV32 467 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 VWA5B2Q8N398 1253 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 CHST13Q8NET6 341 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 SLC39A13Q96H72 371 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PDLIM5Q96HC4 596 aaKnown RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 PPP3R2Q96LZ3 170 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 C11orf54Q9H0W9 315 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-201ENST00000352993 ACTL8Q9H568 366 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
BRCA1-201ENST00000352993 FAM240BA0A1B0GVZ2 78 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 MYBPHLA2RUH7 354 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 IFRD1O00458 451 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 GABRDO14764 452 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RGS14O43566 566 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 AP2A2O94973 939 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 B3GALT4O96024 378 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 MAGEA11P43364 429 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 IL2P60568 153 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 VLDLRP98155 873 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 FBXO43Q4G163 708 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 DALRD3Q5D0E6 543 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 FAM171A1Q5VUB5 890 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 FKBP1CQ5VVH2 108 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SMYD5Q6GMV2 418 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF621Q6ZSS3 439 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF767PQ75MW2 155 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SNX20Q7Z614 316 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 GLRX5Q86SX6 157 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SLC51BQ86UW2 128 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 GLCCI1Q86VQ1 547 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 NIM1KQ8IY84 436 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 C10orf111Q8N326 155 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ZMIZ2Q8NF64 920 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 EEF1AKMT1Q8WVE0 214 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 INPP5KQ9BT40 448 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 TTLL2Q9BWV7 592 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 IL1RAPQ9NPH3 570 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SLC6A13Q9NSD5 602 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 MS4A12Q9NXJ0 267 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 GLTPQ9NZD2 209 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PSORS1C1Q9UIG5 152 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 H3BUI4 141 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RFXANKO14593 260 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms