RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RNF44Q7L0R7 432 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 GPR135Q8IZ08 494 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 DSELQ8IZU8 1212 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 CT55Q8WUE5 264 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ANKRD49Q8WVL7 239 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 IFT81Q8WYA0 676 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ACAT2Q9BWD1 397 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 SPRTNQ9H040 489 aaPredicted RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 CDC42EP4Q9H3Q1 356 aaKnown RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 NOVA2Q9UNW9 492 aaKnown RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 PCDHGA6Q9Y5G7 932 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 AP1M2Q9Y6Q5 423 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 MEN1O00255 615 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 NRP2O60462 931 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 HBQ1P09105 142 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 SPRP35270 261 aaPredicted RBP21.2■□□□□ 0.98
SNX3-202ENST00000349379 DLSTP36957 453 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 ZXDCQ2QGD7 858 aaPredicted RBP21.2■□□□□ 0.98
SNX3-202ENST00000349379 TLDC1Q6P9B6 456 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 MCATQ8IVS2 390 aaKnown RBP21.2■□□□□ 0.98
SNX3-202ENST00000349379 ZSCAN1Q8NBB4 408 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 LRRN4CLQ8ND94 238 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 N4BP2L2Q92802 583 aaPredicted RBP21.2■□□□□ 0.98
SNX3-202ENST00000349379 TSPAN17Q96FV3 270 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 DPH7Q9BTV6 452 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 CAB39LQ9H9S4 337 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 GPAMQ9HCL2 828 aa21.2■□□□□ 0.98
SNX3-202ENST00000349379 MRPS30Q9NP92 439 aaKnown RBP21.2■□□□□ 0.98
SNX3-202ENST00000349379 C21orf140B9A014 251 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 ZSCAN9O15535 394 aaPredicted RBP21.19■□□□□ 0.98
SNX3-202ENST00000349379 FAM155BO75949 473 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 CCNDBP1O95273 360 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 HIST1H2AGP0C0S8 130 aaPredicted RBP21.19■□□□□ 0.98
SNX3-202ENST00000349379 HIST1H2ADP20671 130 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 TBPL1P62380 186 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 ABATP80404 500 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 RHDQ02161 417 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 DNASE1L3Q13609 305 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 USP10Q14694 798 aaKnown RBP21.19■□□□□ 0.98
SNX3-202ENST00000349379 CRTC2Q53ET0 693 aaPredicted RBP21.19■□□□□ 0.98
SNX3-202ENST00000349379 RHBDD2Q6NTF9 364 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 AGTRAPQ6RW13 159 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 PAQR7Q86WK9 346 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 TTC9Q92623 222 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 HIST1H2AHQ96KK5 128 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 HIST1H2AJQ99878 128 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 PLCD4Q9BRC7 762 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 H2AFJQ9BTM1 129 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 SGPP1Q9BX95 441 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 DERL2Q9GZP9 239 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 ACSS3Q9H6R3 686 aa21.19■□□□□ 0.98
SNX3-202ENST00000349379 CCDC177Q9NQR7 707 aaPredicted RBP21.19■□□□□ 0.98
SNX3-202ENST00000349379 ZNF891A8MT65 544 aaPredicted RBP21.18■□□□□ 0.98
SNX3-202ENST00000349379 KLK3P07288 261 aaPredicted RBP21.18■□□□□ 0.98
SNX3-202ENST00000349379 PHBP35232 272 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 SLC12A2P55011 1212 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 RELAQ04206 551 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 TSTA3Q13630 321 aaPredicted RBP21.18■□□□□ 0.98
SNX3-202ENST00000349379 FAM199XQ6PEV8 388 aaPredicted RBP21.18■□□□□ 0.98
SNX3-202ENST00000349379 STARD8Q92502 1023 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 FBXL8Q96CD0 374 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 CLIP3Q96DZ5 547 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 TRIM54Q9BYV2 358 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 FAM117AQ9C073 453 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 KCND3Q9UK17 655 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 RALYQ9UKM9 306 aaKnown RBP21.18■□□□□ 0.98
SNX3-202ENST00000349379 SRPK3Q9UPE1 567 aa21.18■□□□□ 0.98
SNX3-202ENST00000349379 IGSF10Q6WRI0 2623 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 FITM1A5D6W6 292 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 CDC7O00311 574 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 PHGDHO43175 533 aaKnown RBP21.17■□□□□ 0.98
SNX3-202ENST00000349379 SRPX2O60687 465 aaPredicted RBP21.17■□□□□ 0.98
SNX3-202ENST00000349379 CAPN1P07384 714 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 STMN1P16949 149 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 TCN2P20062 427 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 TCTE1Q5JU00 501 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 PRAMEF13Q5VWM6 474 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 LCN10Q6JVE6 187 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 FBXO42Q6P3S6 717 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 PCSK4Q6UW60 755 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 FAM198BQ6UWH4 519 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 IFT20Q8IY31 132 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 ZNF655Q8N720 491 aaPredicted RBP21.17■□□□□ 0.98
SNX3-202ENST00000349379 OR56A3Q8NH54 315 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 PROKR1Q8TCW9 393 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 MR1Q95460 341 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 GBP5Q96PP8 586 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 UBL7Q96S82 380 aaPredicted RBP21.17■□□□□ 0.98
SNX3-202ENST00000349379 CYTH2Q99418 400 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 DPH2Q9BQC3 489 aaPredicted RBP21.17■□□□□ 0.98
SNX3-202ENST00000349379 GPR87Q9BY21 358 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 PCBD2Q9H0N5 130 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 ATG10Q9H0Y0 220 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 CHST8Q9H2A9 424 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 ARL15Q9NXU5 204 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 NFU1Q9UMS0 254 aa21.17■□□□□ 0.98
SNX3-202ENST00000349379 MRPS18BQ9Y676 258 aaKnown RBP21.17■□□□□ 0.98
SNX3-202ENST00000349379 NPEPPSL1A6NEC2 478 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 RECKO95980 971 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 CCND1P24385 295 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms