RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SLC28A3Q9HAS3 691 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 C8orf4Q9NR00 106 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 PPT2Q9UMR5 302 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 GPR34Q9UPC5 381 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 ARHGAP10A1A4S6 786 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 HSD3B1P14060 373 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 HSD3B2P26439 372 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 POLE2P56282 527 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 MYBPC1Q00872 1141 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 PLOD1Q02809 727 aaPredicted RBP19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 ATP6AP1Q15904 470 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 FOXB2Q5VYV0 432 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 DNAJC14Q6Y2X3 702 aaPredicted RBP19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 MSANTD1Q6ZTZ1 278 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 CACUL1Q86Y37 369 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 RNF175Q8N4F7 328 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 CBR4Q8N4T8 237 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 CXorf40AQ8TE69 158 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 METTL2AQ96IZ6 378 aaKnown RBP19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 ZNF696Q9H7X3 374 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 BRF2Q9HAW0 419 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 GPRC5BQ9NZH0 403 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 MSRAQ9UJ68 235 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 PCDHB14Q9Y5E9 798 aa19.73■□□□□ 0.75
CHRNA3-202ENST00000348639 COL4A3Q01955 1670 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 KIF26AQ9ULI4 1882 aaPredicted RBP19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 VEGFDO43915 354 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 E2F2Q14209 437 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 MAP7Q14244 749 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 NHSL2Q5HYW2 709 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 TMTC4Q5T4D3 741 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 ATG9BQ674R7 924 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 SYCE2Q6PIF2 218 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 XKR5Q6UX68 686 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 CARM1Q86X55 608 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 ZNF547Q8IVP9 402 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 ZNF480Q8WV37 535 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 EGLN2Q96KS0 407 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 MTERF1Q99551 399 aaKnown RBP19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 SEPHS2Q99611 448 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 HCN2Q9UL51 889 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 OAZ3Q9UMX2 235 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 PCDHGA11Q9Y5H2 935 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 FADS3Q9Y5Q0 445 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 KCNE2Q9Y6J6 123 aa19.72■□□□□ 0.75
CHRNA3-202ENST00000348639 PRMT3O60678 531 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 KAT7O95251 611 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 SMIM18P0DKX4 95 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 PRPS1L1P21108 318 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 HNRNPFP52597 415 aaKnown RBP19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 DPY19L1Q2PZI1 675 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 PGS1Q32NB8 556 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 GTDC1Q4AE62 458 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 SPRED1Q7Z699 444 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 CHID1Q9BWS9 393 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 KAT8Q9H7Z6 458 aaKnown RBP19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 SGK2Q9HBY8 427 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 SLC6A13Q9NSD5 602 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 INVSQ9Y283 1065 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 GSTA4O15217 222 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 ACOX3O15254 700 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 LDLRP01130 860 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 ZNF8P17098 575 aaPredicted RBP19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 HOXB9P17482 250 aaPredicted RBP19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 WASP42768 502 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 CNTN1Q12860 1018 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 MTAPQ13126 283 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 EGFLAMQ63HQ2 1017 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 GPR180Q86V85 440 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 TMEM132CQ8N3T6 1108 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 CHFRQ96EP1 664 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 HIC2Q96JB3 615 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 RNF145Q96MT1 663 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 CPPED1Q9BRF8 314 aaPredicted RBP19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 CENPKQ9BS16 269 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 DPEP2Q9H4A9 486 aa19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 RUVBL1Q9Y265 456 aaKnown RBP19.71■□□□□ 0.75
CHRNA3-202ENST00000348639 DENND4AQ7Z401 1863 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 ELOVL7A1L3X0 281 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 PDLIM1O00151 329 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 MAP3K13O43283 966 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 POP7O75817 140 aaKnown RBP19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 LRATO95237 230 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 RASAL1O95294 804 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 C7P10643 843 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 PAX7P23759 505 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 PTPN6P29350 595 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 EIF2DP41214 584 aaKnown RBP19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 GRIA2P42262 883 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 FAM46CQ5VWP2 391 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 CAPN13Q6MZZ7 669 aaPredicted RBP19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 SLCO4C1Q6ZQN7 724 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 SYT12Q8IV01 421 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 OR52E4Q8NGH9 312 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 OR2L2Q8NH16 312 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 HM13Q8TCT9 377 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 NEIL2Q969S2 332 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 C11orf24Q96F05 449 aaPredicted RBP19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 MYADMQ96S97 322 aa19.7■□□□□ 0.74
CHRNA3-202ENST00000348639 ANKRD60Q9BZ19 345 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms