RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 KYQ8NBH2 561 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 RCN3Q96D15 328 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 MRPL1Q9BYD6 325 aaKnown RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 ACPTQ9BZG2 426 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 TMEM168Q9H0V1 697 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 AASDHPPTQ9NRN7 309 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 GPR27Q9NS67 375 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 C1orf109Q9NX04 203 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ZIM2Q9NZV7 527 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 TBC1D29Q9UFV1 150 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 PCOLCE2Q9UKZ9 415 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 TRIOO75962 3097 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 OR52A4PA6NMU1 304 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 BBIP1A8MTZ0 92 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 METTL12A8MUP2 240 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 C1GALT1C1LP0DN25 315 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 HSD3B1P14060 373 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ITGAXP20702 1163 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 HSD3B2P26439 372 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 CD27P26842 260 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ELF3P78545 371 aaPredicted RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 SLC25A3Q00325 362 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 MMEL1Q495T6 779 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 MED27Q6P2C8 311 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 NXPE4Q6UWF7 544 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 C10orf67Q8IYJ2 551 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 OR9I1Q8NGQ6 314 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 WDR20Q8TBZ3 569 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 SH3KBP1Q96B97 665 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 KLHDC7BQ96G42 594 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ORAI3Q9BRQ5 295 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 MENTQ9BUN1 341 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ASIC5Q9NY37 505 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 SPTY2D1-AS1A0A0U1RR47 76 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 NPIPB8E9PQR5 432 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 SEC22BO75396 215 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 DCNP07585 359 aaKnown RBP18.04■□□□□ 0.48
PTN-201ENST00000348225 PCSK2P16519 638 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 VARSP26640 1264 aaKnown RBP18.04■□□□□ 0.48
PTN-201ENST00000348225 AK4P27144 223 aaPredicted RBP18.04■□□□□ 0.48
PTN-201ENST00000348225 NEK2P51955 445 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 NME5P56597 212 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 ART3Q13508 389 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 RFTN2Q52LD8 501 aaPredicted RBP18.04■□□□□ 0.48
PTN-201ENST00000348225 CACHD1Q5VU97 1274 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 IL23RQ5VWK5 629 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 SLC30A9Q6PML9 568 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 SLC36A4Q6YBV0 504 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 C17orf64Q86WR6 236 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 PHACTR4Q8IZ21 702 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 TSPEARQ8WU66 669 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 UBE2E3Q969T4 207 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 CMTM7Q96FZ5 175 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 SLC6A18Q96N87 628 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 TMED5Q9Y3A6 229 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 POLR3HQ9Y535 204 aaPredicted RBP18.04■□□□□ 0.48
PTN-201ENST00000348225 PLXND1Q9Y4D7 1925 aa18.04■□□□□ 0.48
PTN-201ENST00000348225 NR5A2O00482 541 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 AXIN1O15169 862 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 SLC22A3O75751 556 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 CD1EP15812 388 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 MAPK1P28482 360 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 PKLRP30613 574 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 BLKP51451 505 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 RPL6Q02878 288 aaKnown RBP18.03■□□□□ 0.48
PTN-201ENST00000348225 SLBPQ14493 270 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTN-201ENST00000348225 CATSPEREQ5SY80 951 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 FUNDC1Q8IVP5 155 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 C2orf73Q8N5S3 287 aaPredicted RBP18.03■□□□□ 0.48
PTN-201ENST00000348225 LMNTD1Q8N9Z9 388 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 OR2L8Q8NGY9 312 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 THTPAQ9BU02 230 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 GSDMCQ9BYG8 508 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 KIR3DX1Q9H7L2 352 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 BRF2Q9HAW0 419 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 PRM3Q9NNZ6 103 aa18.03■□□□□ 0.48
PTN-201ENST00000348225 PNMA8BQ9ULN7 279 aaPredicted RBP18.03■□□□□ 0.48
PTN-201ENST00000348225 NRP2O60462 931 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 RASSF9O75901 435 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 PCNAP12004 261 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 KCNK10P57789 538 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 USP39Q53GS9 565 aaKnown RBP18.02■□□□□ 0.48
PTN-201ENST00000348225 REP15Q6BDI9 236 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 CYB5D1Q6P9G0 228 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 CYP20A1Q6UW02 462 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 PARGQ86W56 976 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 DEFB107AQ8IZN7 70 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 FAM9CQ8IZT9 166 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 MFSD2AQ8NA29 543 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 OR7G3Q8NG95 312 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 OR52E1Q8NGJ3 308 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 CCL4L1Q8NHW4 92 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 PELI2Q9HAT8 420 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 GEMIN8Q9NWZ8 242 aaKnown RBP18.02■□□□□ 0.48
PTN-201ENST00000348225 SCHIP1Q9P0W5 487 aaPredicted RBP18.02■□□□□ 0.48
PTN-201ENST00000348225 TAC3Q9UHF0 121 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 SH2B3Q9UQQ2 575 aa18.02■□□□□ 0.48
PTN-201ENST00000348225 PIPSLA2A3N6 862 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 G6PDP11413 515 aa18.01■□□□□ 0.47
PTN-201ENST00000348225 F3P13726 295 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms