RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 NR5A2O00482 541 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 NRP2O60462 931 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 NDUFS2O75306 463 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 SEC22BO75396 215 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 RASGRP1O95267 797 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 RPS9P46781 194 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 LAPTM5Q13571 262 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 RPE65Q16518 533 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 REP15Q6BDI9 236 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 MED27Q6P2C8 311 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 ABRAXAS1Q6UWZ7 409 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 ULK2Q8IYT8 1036 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 CAMKK1Q8N5S9 505 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 FRMD1Q8N878 549 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 SMPDL3AQ92484 453 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 CMTM7Q96FZ5 175 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 PCED1AQ9H1Q7 454 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 TRNAU1APQ9NX07 287 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 POLR3HQ9Y535 204 aaPredicted RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 FBP2O00757 339 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 KDM1AO60341 852 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 TNFP01375 233 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 MTHFD1P11586 935 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 HSD3B1P14060 373 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 HSD3B2P26439 372 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 VARSP26640 1264 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 RIPK1Q13546 671 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 C10orf62Q5T681 223 aaPredicted RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 CACHD1Q5VU97 1274 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 BLOC1S3Q6QNY0 202 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 CYP20A1Q6UW02 462 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 NXPE4Q6UWF7 544 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 PGAM4Q8N0Y7 254 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 FAM160A2Q8N612 972 aaPredicted RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 LMNTD1Q8N9Z9 388 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 SNX19Q92543 992 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 PRPF19Q9UMS4 504 aaKnown RBP20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 NDUFAF1Q9Y375 327 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 DGKBQ9Y6T7 804 aa20.75■□□□□ 0.91
TSPAN3-202ENST00000346495 A0A088AWK7 358 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 A8MUI8 341 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 G6PDP11413 515 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 PCSK2P16519 638 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 KCNK10P57789 538 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 UFM1P61960 85 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 TBL3Q12788 808 aaKnown RBP20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 HIST2H2ACQ16777 129 aaPredicted RBP20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 WASHC2DQ5SRD0 308 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 CATSPEREQ5SY80 951 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 HIST2H2AA3Q6FI13 130 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 HID1Q8IV36 788 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 PCYOX1LQ8NBM8 494 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 TMEM168Q9H0V1 697 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 BRF2Q9HAW0 419 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 TBC1D29Q9UFV1 150 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 PCOLCE2Q9UKZ9 415 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 SH2B3Q9UQQ2 575 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 TMED5Q9Y3A6 229 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 COLEC10Q9Y6Z7 277 aa20.74■□□□□ 0.91
TSPAN3-202ENST00000346495 PCM1Q15154 2024 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 FAM234BA2RU67 622 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 OR52A4PA6NMU1 304 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 MRASO14807 208 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 CIB2O75838 187 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 AK4P27144 223 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 RAB28P51157 221 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 SLBPQ14493 270 aaKnown RBP eCLIP20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 KIAA0040Q15053 153 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 SLC22A18ASQ8N1D0 253 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 C2orf73Q8N5S3 287 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 OR7G3Q8NG95 312 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 SH3KBP1Q96B97 665 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 WDR41Q9HAD4 459 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 GPR27Q9NS67 375 aa20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 PNMA8BQ9ULN7 279 aaPredicted RBP20.73■□□□□ 0.91
TSPAN3-202ENST00000346495 ANGPT2O15123 496 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 THEGLP0DJG4 465 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 PCNAP12004 261 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 ACPPP15309 386 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 NDUFS1P28331 727 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 MAPK1P28482 360 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 PKLRP30613 574 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 ACTR1BP42025 376 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 POLR2JP52435 117 aaKnown RBP20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 ACTR1AP61163 376 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 MTAPQ13126 283 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 RCAN2Q14206 197 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 COQ5Q5HYK3 327 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 HACD2Q6Y1H2 254 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 C17orf64Q86WR6 236 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 CADM4Q8NFZ8 388 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 OR2L8Q8NGY9 312 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 PROKR1Q8TCW9 393 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 UBE2E3Q969T4 207 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 SPDL1Q96EA4 605 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 CLPTM1LQ96KA5 538 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 ORAI3Q9BRQ5 295 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 SPATA6Q9NWH7 488 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 GEMIN8Q9NWZ8 242 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms