RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SERHL2Q9H4I8 314 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 PLGRKTQ9HBL7 147 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SERHLQ9NQF3 203 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 TP73O15350 636 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 NOBOXO60393 691 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CCNA2P20248 432 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 MAGP20916 626 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SLC6A2P23975 617 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 FIP1L1Q6UN15 594 aaKnown RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 USP53Q70EK8 1073 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 VASH1Q7L8A9 365 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ANKRD46Q86W74 232 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CPNE9Q8IYJ1 553 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 Q96MT0 163 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 TPSD1Q9BZJ3 242 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 NOL6Q9H6R4 1146 aaKnown RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SLAMF7Q9NQ25 335 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 PTGDR2Q9Y5Y4 395 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 G3V2T6 193 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 EI24O14681 340 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CLDN9O95484 217 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 TRBC1P01850 177 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 EFNA1P20827 205 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 AQP1P29972 269 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 GGT5P36269 586 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 HSPA7P48741 367 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ELAVL3Q14576 367 aaKnown RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 EIPR1Q53HC9 387 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 INO80DQ53TQ3 878 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 TNFAIP8L3Q5GJ75 292 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SULT1C3Q6IMI6 304 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 TRNP1Q6NT89 227 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 RANBP3LQ86VV4 465 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 OR2T12Q8NG77 320 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 RASSF5Q8WWW0 418 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 SLC47A1Q96FL8 570 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 GPR22Q99680 433 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 C1QTNF1Q9BXJ1 281 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ZBTB26Q9HCK0 441 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 EQTNQ9NQ60 294 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 OSER1Q9NX31 292 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CCDC162PA2VCL2 907 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 MMP20O60882 483 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 AGR2O95994 175 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF865P0CJ78 1059 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 RAB33AQ14088 237 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 PAFAH1B3Q15102 231 aaKnown RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CCDC92Q53HC0 331 aaPredicted RBP10.62□□□□□ -0.71
CLCN6-202ENST00000346436 MORN1Q5T089 497 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CEP97Q8IW35 865 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ADHFE1Q8IWW8 467 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CADM2Q8N3J6 435 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 DEFB126Q9BYW3 111 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 RMI1Q9H9A7 625 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 ZDHHC3Q9NYG2 299 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 DNAJB4Q9UDY4 337 aa10.62□□□□□ -0.71
CLCN6-202ENST00000346436 CDC42P60953 191 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 ST13P5Q8NFI4 369 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 TEX47Q8TBZ9 253 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 KLHL1Q9NR64 748 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 FKBPLQ9UIM3 349 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 KIAA1551Q9HCM1 1747 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 AHDC1Q5TGY3 1603 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 DUXAA6NLW8 204 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 MT-ND5P03915 603 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 ALOX12P18054 663 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 RPS9P46781 194 aaKnown RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 UBE2J2Q8N2K1 259 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF540Q8NDQ6 660 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 OR7A2PQ8NGA2 310 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 VPS35Q96QK1 796 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 FCRL5Q96RD9 977 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 OLFM1Q99784 485 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 CCSER2Q9H7U1 834 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 CXorf21Q9HAI6 301 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 RASSF1Q9NS23 344 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 IFT80Q9P2H3 777 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 OAZ3Q9UMX2 235 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 TNRC6CQ9HCJ0 1690 aaKnown RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 FAM227AF5H4B4 570 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 DHRS4L1P0CG22 281 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 IL4RP24394 825 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 HRH2P25021 359 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 RPS24P62847 133 aaKnown RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 CSNK2BP67870 215 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 TLR1Q15399 786 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 PAQR3Q6TCH7 311 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 NTAN1Q96AB6 310 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF641Q96N77 438 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 EFCAB11Q9BUY7 163 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 BBIP1A8MTZ0 92 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 GRID2O43424 1007 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 ENDOUP21128 410 aaKnown RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 C2orf80Q0P641 193 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 LCP2Q13094 533 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 CARTPTQ16568 116 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 PRRT3Q5FWE3 981 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 KIAA0930Q6ICG6 404 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms