RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 EIF5AL1Q6IS14 154 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 CERS6Q6ZMG9 384 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 GEMIN6Q8WXD5 167 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PFDN5Q99471 154 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 AIFM2Q9BRQ8 373 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 RUVBL1Q9Y265 456 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PADI2Q9Y2J8 665 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF780BQ9Y6R6 833 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SLC19A2O60779 497 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 PCDH8O95206 1070 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 CKMT1AP12532 417 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 EPHB3P54753 998 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ABHD18Q0P651 414 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 LIPKQ5VXJ0 399 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 CLEC4CQ8WTT0 213 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 MGLLQ99685 303 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 MMP28Q9H239 520 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 FOLH1BQ9HBA9 442 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SRRDQ9UH36 339 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 GLYATL1P3A0A0U1RQE8 302 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SPATA31C2B4DYI2 1134 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 QSOX1O00391 747 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 EEF1E1O43324 174 aaKnown RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SOX14O95416 240 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 HTR1EP28566 365 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 DNAJB13P59910 316 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SNRPD1P62314 119 aaKnown RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 RPP38P78345 283 aaKnown RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 HSPB3Q12988 150 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 FADDQ13158 208 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SDHAF4Q5VUM1 108 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SLC25A25Q6KCM7 469 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 OR6K2Q8NGY2 324 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF597Q96LX8 424 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 TRIM2Q9C040 744 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 KCNK13Q9HB14 408 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 IFT46Q9NQC8 304 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 CSN2P05814 226 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SRPRAP08240 638 aaKnown RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SSR2P43308 183 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SPANXN4Q5MJ08 99 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 TNFAIP8L2Q6P589 184 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 CFAP52Q8N1V2 620 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 VWA5B2Q8N398 1253 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 METTL25Q8N6Q8 603 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SLC43A3Q8NBI5 491 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 MYO19Q96H55 970 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 NDUFAF4Q9P032 175 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SLC2A6Q9UGQ3 507 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF510Q9Y2H8 683 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 CD2P06729 351 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 LAMP2P13473 410 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 PRPS1L1P21108 318 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 GADD45AP24522 165 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 PAMR1Q6UXH9 720 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 FAM46DQ8NEK8 389 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 OR5H6Q8NGV6 325 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 MYRFLQ96LU7 910 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 MCCC1Q96RQ3 725 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 DPEP3Q9H4B8 488 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 PCDHB16Q9NRJ7 776 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM181Q9P2C4 612 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 TNFRSF10DQ9UBN6 386 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 VIPP01282 170 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ESR1P03372 595 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 HOXD13P35453 343 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 NFKB2Q00653 900 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ATXN7L3Q14CW9 347 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-202ENST00000345356 OR4C6Q8NH72 309 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ALPK1Q96QP1 1244 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 ARL6Q9H0F7 186 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 POU2F3Q9UKI9 436 aa11.81□□□□□ -0.52
COL12A1-202ENST00000345356 STSP08842 583 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 SLC3A1Q07837 685 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PARP15Q460N3 678 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 AGAP6Q5VW22 663 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 HLA-DQA1Q5Y7H0 255 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PDZD9Q8IXQ8 264 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 RPLP0P6Q8NHW5 317 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TFAP2CQ92754 450 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 COPS5Q92905 334 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 FATE1Q969F0 183 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 AGAP4Q96P64 663 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 FCRL5Q96RD9 977 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PARK7Q99497 189 aaKnown RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 FKBPLQ9UIM3 349 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 DNMT3LQ9UJW3 386 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ARL5AQ9Y689 179 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 B8ZZF3 427 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PPEF2O14830 753 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PRMT3O60678 531 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms