RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TNNI3P19429 210 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OXTRP30559 389 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DGKQP52824 942 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 DIO3P55073 304 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SCARB2Q14108 478 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KANK2Q63ZY3 851 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CXorf57Q6NSI4 855 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF613Q6PF04 617 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 BEND5Q7L4P6 421 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GET4Q7L5D6 327 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 COPS5Q92905 334 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TBC1D17Q9HA65 648 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SDR39U1Q9NRG7 319 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MRPL42Q9Y6G3 142 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 KIAA1217Q5T5P2 1943 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 M0R233 179 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CDK14O94921 469 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SNX4O95219 450 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 AKR1A1P14550 325 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NRIP1P48552 1158 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TREML2Q5T2D2 321 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 FRG2Q64ET8 278 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PDE12Q6L8Q7 609 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SNX20Q7Z614 316 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 RAVER1Q8IY67 606 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TIFAQ96CG3 184 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 FRG2BQ96QU4 278 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SLC6A15Q9H2J7 730 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 HSPB11Q9Y547 144 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHGB1Q9Y5G3 927 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF879B4DU55 563 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ANKRD66B4E2M5 251 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MAFKO60675 156 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OR7A10O76100 309 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GNAO1P09471 354 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SMIM18P0DKX4 95 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PRKACGP22612 351 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 C2orf80Q0P641 193 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CHIT1Q13231 466 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 LARS2Q15031 903 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SLITRK4Q8IW52 837 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 AGAP4Q96P64 663 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 GTPBP2Q9BX10 602 aaKnown RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MAGED1Q9Y5V3 778 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ZFP37Q9Y6Q3 630 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CD1DP15813 335 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CTPS1P17812 591 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 CENPAP49450 140 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TAF1CQ15572 869 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-203ENST00000343508 Q6ZNX1 250 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 MTSS1LQ765P7 747 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 OOSP2Q86WS3 158 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 NDNFQ8TB73 568 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 TBC1D15Q8TC07 691 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ANKRD49Q8WVL7 239 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 ACDQ96AP0 544 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 FCRL4Q96PJ5 515 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 SMOC2Q9H3U7 446 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 AMBNQ9NP70 447 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 VPS29Q9UBQ0 182 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHGB6Q9Y5F9 930 aa4.67□□□□□ -1.66
CSMD3-203ENST00000343508 H3BM21 787 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 WNT9AO14904 365 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ENTPD6O75354 484 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OMPP47874 163 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 AKR1D1P51857 326 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PIGFQ07326 219 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CRB2Q5IJ48 1285 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 IDNKQ5T6J7 187 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ADNP2Q6IQ32 1131 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PAMR1Q6UXH9 720 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RPS27LQ71UM5 84 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 C16orf59Q7L2K0 433 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 UBE2Q1Q7Z7E8 422 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TAC4Q86UU9 113 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM102Q8N9M5 508 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 AQP11Q8NBQ7 271 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PHC3Q8NDX5 983 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SIMC1Q8NDZ2 872 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DNAJA4Q8WW22 397 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TRIB3Q96RU7 358 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ADAM2Q99965 735 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 RNF181Q9P0P0 153 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SIX4Q9UIU6 781 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 WWP2O00308 870 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ARHGEF15O94989 841 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ATE1O95260 518 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ALPLP05186 524 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 ZBTB48P10074 688 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PUDPQ08623 228 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 PTGES3Q15185 160 aaKnown RBP4.66□□□□□ -1.66
CSMD3-203ENST00000343508 DUSP28Q4G0W2 176 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM17Q86X19 198 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 LGI4Q8N135 537 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 C10orf53Q8N6V4 93 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 KDM1BQ8NB78 822 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 SLC37A3Q8NCC5 494 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 OR7G1Q8NGA0 311 aa4.66□□□□□ -1.66
CSMD3-203ENST00000343508 CMTM7Q96FZ5 175 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms