RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 GRK7Q8WTQ7 553 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 DPH7Q9BTV6 452 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 NDC1Q9BTX1 674 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 ACSS2Q9NR19 701 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 IARS2Q9NSE4 1012 aaKnown RBP16.31■□□□□ 0.2
BRCC3-202ENST00000340647 CUTCQ9NTM9 273 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 IFT80Q9P2H3 777 aaPredicted RBP16.31■□□□□ 0.2
BRCC3-202ENST00000340647 SCN3AQ9NY46 2000 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 A0A1B0GX78 115 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 SORBS2O94875 1100 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 ALAS2P22557 587 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 SKIV2L2P42285 1042 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 OR1D4P47884 311 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 CD97P48960 835 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 VSX2P58304 361 aaPredicted RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 NKG7Q16617 165 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 PRTGQ2VWP7 1150 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 RBM20Q5T481 1227 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 TTC23LQ6PF05 361 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 MED25Q71SY5 747 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 OVCH1Q7RTY7 1134 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 PIWIL4Q7Z3Z4 852 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 KCNMB4Q86W47 210 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 PAQR7Q86WK9 346 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 LURAP1LQ8IV03 231 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 CNTN4Q8IWV2 1026 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 CPNE9Q8IYJ1 553 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 SHISA5Q8N114 240 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 METTL27Q8N6F8 245 aaPredicted RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 RBMXL3Q8N7X1 1067 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 TMEM102Q8N9M5 508 aaPredicted RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 GSDMBQ8TAX9 411 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 C10orf90Q96M02 699 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 FOPNLQ96NB1 174 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 NDNQ99608 321 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 EBNA1BP2Q99848 306 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 SELENOSQ9BQE4 189 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 SLC26A1Q9H2B4 701 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 TXLNGQ9NUQ3 528 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 INTS7Q9NVH2 962 aaKnown RBP16.3■□□□□ 0.2
BRCC3-202ENST00000340647 CTSFQ9UBX1 484 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 ADAMTS6Q9UKP5 1117 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 VPS9D1Q9Y2B5 631 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 LRRK2Q5S007 2527 aa16.3■□□□□ 0.2
BRCC3-202ENST00000340647 A6NL46 340 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 VSTM2BA6NLU5 285 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 E5RI56 91 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PFDN6O15212 129 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 SRPX2O60687 465 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-202ENST00000340647 AHSGP02765 367 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 MPC1LP0DKB6 136 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 TCP1P17987 556 aaKnown RBP16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PGAM1P18669 254 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PGDP52209 483 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PNLIPRP1P54315 467 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 CDKN2DP55273 166 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 ARHGAP19Q14CB8 494 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PPP1R7Q15435 360 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 ZC3H12BQ5HYM0 836 aaKnown RBP16.29■□□□□ 0.2
BRCC3-202ENST00000340647 TRMT10BQ6PF06 316 aaKnown RBP16.29■□□□□ 0.2
BRCC3-202ENST00000340647 LMNTD2Q8IXW0 634 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 TEX19Q8NA77 164 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 SMPDL3AQ92484 453 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 INPP5DQ92835 1189 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PTERQ96BW5 349 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 CAPZA3Q96KX2 299 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 SMAD5Q99717 465 aaKnown RBP16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PLCD4Q9BRC7 762 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 P4HTMQ9NXG6 502 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 SH2B3Q9UQQ2 575 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 PADI2Q9Y2J8 665 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
BRCC3-202ENST00000340647 USP9XQ93008 2570 aaPredicted RBP16.29■□□□□ 0.2
BRCC3-202ENST00000340647 GOLGA6L10A0A0M3HER8 536 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 H0YGG7 62 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 SOCS6O14544 535 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 TSPAN12O95859 305 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 IMPA1P29218 277 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 FOLR3P41439 243 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 ARSFP54793 590 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 ARF3P61204 181 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-202ENST00000340647 PRDX1Q06830 199 aaKnown RBP16.28■□□□□ 0.2
BRCC3-202ENST00000340647 RAPSNQ13702 412 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 GRM7Q14831 915 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 TCTE1Q5JU00 501 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 DCAF10Q5QP82 559 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 HP1BP3Q5SSJ5 553 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-202ENST00000340647 ICE2Q659A1 982 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 HIBCHQ6NVY1 386 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-202ENST00000340647 RAB43Q86YS6 212 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 FKBP10Q96AY3 582 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 OR2A5Q96R48 311 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 C17orf62Q9BQA9 187 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 TRIM51Q9BSJ1 452 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 ZBTB20Q9HC78 741 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-202ENST00000340647 CUEDC1Q9NWM3 386 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-202ENST00000340647 IRAK4Q9NWZ3 460 aa16.28■□□□□ 0.2
BRCC3-202ENST00000340647 ANKMY1Q9P2S6 941 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms