RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 STEAP3Q658P3 488 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 BPHLQ86WA6 291 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PLD3Q8IV08 490 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TTC29Q8NA56 475 aaPredicted RBP11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ATG16L2Q8NAA4 619 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 RAET1EQ8TD07 263 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 MAL2Q969L2 176 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ULK4Q96C45 1275 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 TPD52L3Q96J77 140 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 KCNC2Q96PR1 638 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ASPSCR1Q9BZE9 553 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 GPR63Q9BZJ6 419 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 P2RY12Q9H244 342 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 PARVBQ9HBI1 364 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 OPTCQ9UBM4 332 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 ORC6Q9Y5N6 252 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 VCANP13611 3396 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 FRMPD3Q5JV73 1810 aa11.64□□□□□ -0.55
CCDC144CP-201ENST00000340196 F11P03951 625 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 S100BP04271 92 aaPredicted RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 ACVR2AP27037 513 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PTPN6P29350 595 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 NRIP1P48552 1158 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 ALDH7A1P49419 539 aaKnown RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 YBEYP58557 167 aaPredicted RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 TRIM71Q2Q1W2 868 aaKnown RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 LRRC73Q5JTD7 316 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 AGAP7PQ5VUJ5 663 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 RNF219Q5W0B1 726 aaPredicted RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 LHX8Q68G74 356 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PDE12Q6L8Q7 609 aaKnown RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 LSRQ86X29 649 aaPredicted RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 SYTL1Q8IYJ3 562 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 CLECL1Q8IZS7 167 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 CACTIN-AS1Q8N1I8 211 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 MCFD2Q8NI22 146 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 APH1BQ8WW43 257 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZHX1-C8orf76Q96EF9 292 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 APIPQ96GX9 242 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 APOLD1Q96LR9 279 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PPP3R2Q96LZ3 170 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 DHRS7Q9Y394 339 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PCDHB5Q9Y5E4 795 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 EFCAB9A8MZ26 197 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 MANBAO00462 879 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLC16A6O15403 523 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 RGS14O43566 566 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 FKBP9O95302 570 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 EPORP19235 508 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 GADD45AP24522 165 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 MADCAM1Q13477 382 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 DOC2BQ14184 412 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 ADNP2Q6IQ32 1131 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 FKBP9P1Q75LS8 142 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 TMEM173Q86WV6 379 aaPredicted RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 POC5Q8NA72 575 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 SKA2Q8WVK7 121 aaPredicted RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PEX13Q92968 403 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 VMP1Q96GC9 406 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 ROGDIQ9GZN7 287 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 DCSTAMPQ9H295 470 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 DUSP21Q9H596 190 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 IL37Q9NZH6 218 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 FNIP2Q9P278 1114 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 SAMHD1Q9Y3Z3 626 aaKnown RBP11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PCDHGA3Q9Y5H0 932 aa11.63□□□□□ -0.55
CCDC144CP-201ENST00000340196 PIKFYVEQ9Y2I7 2098 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 IFRD1O00458 451 aaPredicted RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 GAPDHSO14556 408 aaPredicted RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLC22A1O15245 554 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RGS10O43665 173 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ZNF623O75123 536 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 SCELO95171 688 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 IGLV3-27P01718 113 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 OPN1SWP03999 348 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RHOCP08134 193 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CCDC159P0C7I6 412 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ARHGEF6Q15052 776 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ATAD3BQ5T9A4 648 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CACHD1Q5VU97 1274 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 PRSS55Q6UWB4 352 aaPredicted RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RFLNAQ6ZTI6 216 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 USP43Q70EL4 1123 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 C11orf74Q86VG3 221 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 NLGN4XQ8N0W4 816 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CELF2-AS1Q8N7Q2 184 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLC43A3Q8NBI5 491 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 SLAIN1Q8ND83 568 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 OR52J3Q8NH60 311 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 CAPSLQ8WWF8 208 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 FATE1Q969F0 183 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 REXO5Q96IC2 774 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 ASB8Q9H765 288 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 TLR8Q9NR97 1041 aaKnown RBP11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 SAGE1Q9NXZ1 904 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 KLHL3Q9UH77 587 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 RAD51BO15315 384 aa11.62□□□□□ -0.55
CCDC144CP-201ENST00000340196 YY2O15391 372 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms