RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TRMT11Q7Z4G4 463 aaKnown RBP22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 TMPRSS11BQ86T26 416 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 TFAP2CQ92754 450 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 OTUB2Q96DC9 234 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 CCM2Q9BSQ5 444 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 ACAT2Q9BWD1 397 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 OSBPL11Q9BXB4 747 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 SPNS1Q9H2V7 528 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 CNOT11Q9UKZ1 510 aaKnown RBP22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 U3KQV3 271 aa22.4■■□□□ 1.18
CLPTM1-201ENST00000337392 SLC9A3R1O14745 358 aaPredicted RBP22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 SCAMP1O15126 338 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 GSTA4O15217 222 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 LZTS3O60299 673 aaPredicted RBP22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 TNFAIP8O95379 198 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 GPIP06744 558 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 S100A3P33764 101 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 YAP1P46937 504 aaKnown RBP22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 LAPTM4AQ15012 233 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 PLPP6Q8IY26 295 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 SYTL1Q8IYJ3 562 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 NETO1Q8TDF5 533 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 CHFRQ96EP1 664 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 COQ10AQ96MF6 247 aa22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 DPH2Q9BQC3 489 aaPredicted RBP22.39■■□□□ 1.18
CLPTM1-201ENST00000337392 H3BM21 787 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 IL6P05231 212 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 EPHX1P07099 455 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 ADRB3P13945 408 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 MAD2L1Q13257 205 aaPredicted RBP22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 ATP6AP1Q15904 470 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 HNRNPA1L2Q32P51 320 aaKnown RBP22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 RBM44Q6ZP01 1051 aaKnown RBP22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 FAM83HQ6ZRV2 1179 aaPredicted RBP22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 UBE2Q1Q7Z7E8 422 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 ADI1Q9BV57 179 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 PLA2G2FQ9BZM2 168 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 REXO4Q9GZR2 422 aaKnown RBP22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 SGK2Q9HBY8 427 aa22.39■■□□□ 1.17
CLPTM1-201ENST00000337392 PRR23AA6NEV1 266 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 PRKD3O94806 890 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 JUPP14923 745 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 PTPN6P29350 595 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 GSTT1P30711 240 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 ZNF740Q8NDX6 193 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 ZNF480Q8WV37 535 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 KLK6Q92876 244 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 HIC2Q96JB3 615 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 LGR4Q9BXB1 951 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 EPOPA6NHQ4 379 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 C5orf67F2Z3F1 127 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 HOXC11O43248 304 aaPredicted RBP22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 AP1G1O43747 822 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 CPSF4O95639 269 aaKnown RBP22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 ANXA6P08133 673 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 SOX9P48436 509 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 CLDN8P56748 225 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 TCEA2Q15560 299 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 UGT8Q16880 541 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 RUNDC3AQ59EK9 446 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 LDLRAP1Q5SW96 308 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 SYT12Q8IV01 421 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 WDR20Q8TBZ3 569 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 FBXL8Q96CD0 374 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 NUS1Q96E22 293 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 KLHL42Q9P2K6 505 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 GON4LQ3T8J9 2241 aa22.38■■□□□ 1.17
CLPTM1-201ENST00000337392 LATO43561 262 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 LDLRP01130 860 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 SRPRAP08240 638 aaKnown RBP22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 ZNF8P17098 575 aaPredicted RBP22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 HSPA13P48723 471 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 AP1S2P56377 157 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 TXNL4AP83876 142 aaKnown RBP22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 ZNF786Q8N393 782 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 GALNT15Q8N3T1 639 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 RPP25Q9BUL9 199 aaKnown RBP22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 KAT8Q9H7Z6 458 aaKnown RBP22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 UPK1AO00322 258 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 LINC01565O15544 149 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 NOBOXO60393 691 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 PRKACGP22612 351 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 TBPL1P62380 186 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 MERTKQ12866 999 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 HKDC1Q2TB90 917 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 ARHGAP22Q7Z5H3 698 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 RIMKLAQ8IXN7 391 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 C1orf52Q8N6N3 182 aaKnown RBP22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 OR8J3Q8NGG0 315 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 TMBIM1Q969X1 311 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 FAM162AQ96A26 154 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 DKK3Q9UBP4 350 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 MAGEL2Q9UJ55 1249 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 DOCK8Q8NF50 2099 aa22.37■■□□□ 1.17
CLPTM1-201ENST00000337392 CXorf51AA0A1B0GTR3 108 aa22.36■■□□□ 1.17
CLPTM1-201ENST00000337392 LILRB5O75023 590 aa22.36■■□□□ 1.17
CLPTM1-201ENST00000337392 LAMP1P11279 417 aa22.36■■□□□ 1.17
CLPTM1-201ENST00000337392 SP140Q13342 867 aa22.36■■□□□ 1.17
CLPTM1-201ENST00000337392 EGFLAMQ63HQ2 1017 aa22.36■■□□□ 1.17
CLPTM1-201ENST00000337392 LEMD2Q8NC56 503 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms