RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CDH7Q9ULB5 785 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 YARS2Q9Y2Z4 477 aaKnown RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PCDHGC4Q9Y5F7 938 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 LRP6O75581 1613 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 ENGP17813 658 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 FSHRP23945 695 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 SP2Q02086 613 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 FBXO43Q4G163 708 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 XKR6Q5GH73 641 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 PIAS4Q8N2W9 510 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 OR4F6Q8NGB9 312 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 ZFP42Q96MM3 310 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 FYTTD1Q96QD9 318 aaKnown RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 FCRL5Q96RD9 977 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 GMLQ99445 158 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 ZYG11BQ9C0D3 744 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 FBXW11Q9UKB1 542 aa12.93□□□□□ -0.34
COL2A1-201ENST00000337299 MAFBQ9Y5Q3 323 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-201ENST00000337299 A0A1W2PQ09 198 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 H3BM21 787 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 DLGAP1O14490 977 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 SEPT4O43236 478 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 KHDRBS3O75525 346 aaKnown RBP12.92□□□□□ -0.34
COL2A1-201ENST00000337299 GADD45GO95257 159 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 CDH18Q13634 790 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 LRIT3Q3SXY7 679 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 KCTD7Q96MP8 289 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 ERMAPQ96PL5 475 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-201ENST00000337299 BCO2Q9BYV7 579 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 FKBPLQ9UIM3 349 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 SDK1Q7Z5N4 2213 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 MYBPHLA2RUH7 354 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 UPK3BL1B0FP48 263 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 UPK3BL2E5RIL1 263 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 STK16O75716 305 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 ATP4BP51164 291 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 SLC10A7Q0GE19 358 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 AQP6Q13520 282 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 COQ8AQ8NI60 647 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 TFB2MQ9H5Q4 396 aaKnown RBP12.92□□□□□ -0.34
COL2A1-201ENST00000337299 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 OR5F1O95221 314 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 SLC25A14O95258 325 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-201ENST00000337299 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 PPP2R1BP30154 601 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 SLC11A2P49281 568 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 ATP13A5Q4VNC0 1218 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 FAM219BQ5XKK7 198 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 C2CD4AQ8NCU7 369 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-201ENST00000337299 MED30Q96HR3 178 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 ABCC13Q9NSE7 274 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 AIG1Q9NVV5 245 aa12.92□□□□□ -0.34
COL2A1-201ENST00000337299 NDST3O95803 873 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 HPRP00739 348 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 PIGRP01833 764 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 PIGAP37287 484 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 OR3A3P47888 321 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 FCGRTP55899 365 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 BCL2L1Q07817 233 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 NPRL3Q12980 569 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 NDUFAF6Q330K2 333 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF438Q7Z4V0 828 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 Q8N402 240 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 HMCESQ96FZ2 354 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 PKP4Q99569 1192 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 NANSQ9NR45 359 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MARCH4Q9P2E8 410 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 WWP2O00308 870 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 CPN2P22792 545 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 CDKN2DP55273 166 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF280AP59817 542 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SOWAHCQ53LP3 525 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 PIK3R6Q5UE93 754 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 C22orf42Q6IC83 251 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 ANKRD54Q6NXT1 300 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MACC1Q6ZN28 852 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 COMMD7Q86VX2 200 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 CILP2Q8IUL8 1156 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 NATD1Q8N6N6 113 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 OR52B6Q8NGF0 335 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SLC22A17Q8WUG5 538 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MUL1Q969V5 352 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 C8orf48Q96LL4 319 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MARCH2Q9P0N8 246 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 RIMKLBQ9ULI2 386 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF195O14628 629 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 KERAO60938 352 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 ALPLP05186 524 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 DAOAP59103 153 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms