RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 HOXC11O43248 304 aaPredicted RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 TFF2Q03403 129 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 PRKCQQ04759 706 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 C16orf72Q14CZ0 275 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 FRG2Q64ET8 278 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 FAAH2Q6GMR7 532 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 CHST15Q7LFX5 561 aaPredicted RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 AADATQ8N5Z0 425 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF480Q8WV37 535 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 BIRC7Q96CA5 298 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 OTUB2Q96DC9 234 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 FRG2BQ96QU4 278 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 OR51B5Q9H339 312 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 BATF3Q9NR55 127 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 CARNS1A5YM72 827 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 GFYI3L273 518 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 C8BP07358 591 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 C8GP07360 202 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 AQP1P29972 269 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ERVK-21P61565 698 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 USP39Q53GS9 565 aaKnown RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ANGPTL8Q6UXH0 198 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ADGRG5Q8IZF4 528 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 CXorf40AQ8TE69 158 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 GTF2H4Q92759 462 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 PRPF18Q99633 342 aaKnown RBP12.2□□□□□ -0.46
LIMK1-201ENST00000336180 MACROD1Q9BQ69 325 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 NTMT1Q9BV86 223 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 XKR8Q9H6D3 395 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ZIM2Q9NZV7 527 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 ASF1AQ9Y294 204 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 NEUROG3Q9Y4Z2 214 aa12.2□□□□□ -0.46
LIMK1-201ENST00000336180 GSTA4O15217 222 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 YY2O15391 372 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 PTGER1P34995 402 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SLC6A12P48065 614 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 CDH15P55291 814 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 TBPL1P62380 186 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 MC1RQ01726 317 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 ELAVL3Q14576 367 aaKnown RBP12.19□□□□□ -0.46
LIMK1-201ENST00000336180 ZFP1Q6P2D0 407 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 ERN2Q76MJ5 926 aaKnown RBP12.19□□□□□ -0.46
LIMK1-201ENST00000336180 EPHX4Q8IUS5 362 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 C1orf52Q8N6N3 182 aaKnown RBP12.19□□□□□ -0.46
LIMK1-201ENST00000336180 FLCNQ8NFG4 579 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 COQ10AQ96MF6 247 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SLC2A11Q9BYW1 496 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SFXN1Q9H9B4 322 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 ABCD2Q9UBJ2 740 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 LIMD1Q9UGP4 676 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 ERVK-11Q9UQG0 969 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 KCNK6Q9Y257 313 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 PCDHB14Q9Y5E9 798 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 EDDM13A0A1B0GTR0 161 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 MAGEA13PA6NCF6 341 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SLC28A1O00337 649 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 CASQ2O14958 399 aaPredicted RBP12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SLC31A1O15431 190 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 DIRAS1O95057 198 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 RB1P06400 928 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SLC7A1P30825 629 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 RPS13P62277 151 aaKnown RBP12.19□□□□□ -0.46
LIMK1-201ENST00000336180 KIAA0040Q15053 153 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 PLEKHS1Q5SXH7 462 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 TBPL2Q6SJ96 375 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 RD3Q7Z3Z2 195 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 SYT12Q8IV01 421 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 HID1Q8IV36 788 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 LEMD2Q8NC56 503 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 TRPS1Q9UHF7 1281 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 BCAP29Q9UHQ4 241 aa12.19□□□□□ -0.46
LIMK1-201ENST00000336180 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 RTCAO00442 366 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 CATP04040 527 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SRPRAP08240 638 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 PSMA4P25789 261 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 MRPS35P82673 323 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 HYAL1Q12794 435 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 INPP5AQ14642 412 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 NKG7Q16617 165 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 OR52E8Q6IFG1 317 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF621Q6ZSS3 439 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 MAGEE2Q8TD90 523 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 CYGBQ8WWM9 190 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 MKRN2Q9H000 416 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 RDH14Q9HBH5 336 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SNX6Q9UNH7 406 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 RWDD3Q9Y3V2 267 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 KCNE1BA0A087WTH5 132 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 BOLA2-SMG1P6H3BVE0 249 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 EI24O14681 340 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SLCO2B1O94956 709 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 KCNH1O95259 989 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 CBSLP0DN79 551 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 PFKLP17858 780 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 S100A3P33764 101 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms