RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CHRM1P11229 460 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 LUMP51884 338 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ASTE1Q2TB18 679 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 DPY19L3Q6ZPD9 716 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GALNT7Q86SF2 657 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 LHFPL3Q86UP9 236 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF101Q8IZC7 436 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 DEDD2Q8WXF8 326 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ZDHHC18Q9NUE0 388 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 A0A0J9YVX5 310 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 TRIM64A6NGJ6 449 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 TRIM64BA6NI03 449 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GPR89AB7ZAQ6 455 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 WASH3PC4AMC7 463 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GPR89BP0CG08 455 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 RPS12P25398 132 aaKnown RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SLC1A2P43004 574 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 NRLP54845 237 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CAPSQ13938 189 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 NFE2L1Q14494 772 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PTGR1Q14914 329 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 DCLRE1AQ6PJP8 1040 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CPNE9Q8IYJ1 553 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 UBQLNLQ8IYU4 475 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SLC22A15Q8IZD6 547 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 AQP11Q8NBQ7 271 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 TCTEX1D2Q8WW35 142 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 FCAMRQ8WWV6 532 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PYURFQ96I23 114 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 BIRC8Q96P09 236 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM209Q96SK2 561 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 MAPKAP1Q9BPZ7 522 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CD84Q9UIB8 345 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 A0A1W2PQ67 120 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 B8ZZF3 427 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PDHXO00330 501 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SLC9A3R1O14745 358 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 OR1F1O43749 312 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 DIRAS1O95057 198 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 VEGFAP15692 232 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 HDCP19113 662 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CHMP24386 653 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PSEN2P49810 448 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GSK3BP49841 420 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SMSP52788 366 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 LSAMPQ13449 338 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 MSANTD2Q6P1R3 559 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CCBE1Q6UXH8 406 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PTF1AQ7RTS3 328 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SCML4Q8N228 414 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 JAGN1Q8N5M9 183 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 DTX3Q8N9I9 347 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PROKR2Q8NFJ6 384 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 OR10Q1Q8NGQ4 319 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 TIFAQ96CG3 184 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 FGFBP2Q9BYJ0 223 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 NMUR1Q9HB89 426 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PAK1IP1Q9NWT1 392 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 C1orf196B1AJZ1 125 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM233B4DJY2 109 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 BCAS2O75934 225 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CH25HO95992 272 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 MSR1P21757 451 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 FXYD6P3P58550 94 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 COL28A1Q2UY09 1125 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ARSJQ5FYB0 599 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ZDHHC20Q5W0Z9 365 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SLC8B1Q6J4K2 584 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CEP97Q8IW35 865 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF675Q8TD23 568 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GRHL3Q8TE85 626 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 AUTS2Q8WXX7 1259 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ITPKCQ96DU7 683 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CPNE2Q96FN4 548 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 UROC1Q96N76 676 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PKP4Q99569 1192 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 CGREF1Q99674 301 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 HEPHQ9BQS7 1158 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF395Q9H8N7 513 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 HMX1Q9NP08 348 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 FAIMQ9NVQ4 179 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GNG8Q9UK08 70 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 A0A1W2PQH9 124 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 GNAZP19086 355 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 WDR45BQ5MNZ6 344 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ATAD3CQ5T2N8 411 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 PCSK9Q8NBP7 692 aaKnown RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ASPNQ9BXN1 380 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ARL6Q9H0F7 186 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ADARB2Q9NS39 739 aaKnown RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 SEC14L4Q9UDX3 406 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ZDHHC2Q9UIJ5 367 aa9.58□□□□□ -0.88
COL4A6-201ENST00000334504 RUVBL1Q9Y265 456 aaKnown RBP9.58□□□□□ -0.88
COL4A6-201ENST00000334504 ADM5C9JUS6 153 aa9.57□□□□□ -0.88
COL4A6-201ENST00000334504 SAP18O00422 153 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms