RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MEF2AQ02078 507 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 IFI44LQ53G44 452 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 PDZK1Q5T2W1 519 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 OR5AK3PQ8NH89 298 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 SLC17A9Q9BYT1 436 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ELL3Q9HB65 397 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 UTS2RQ9UKP6 389 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 VIRMAQ69YN4 1812 aaKnown RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 TPST2O60704 377 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 JUNP05412 331 aaKnown RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ALOX5P09917 674 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 PIM1P11309 404 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 IGFBP5P24593 272 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 SUOXP51687 545 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ARMC4Q5T2S8 1044 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 LPCAT4Q643R3 524 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 TSPAN33Q86UF1 283 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 PLD6Q8N2A8 252 aaKnown RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 DNAJB8Q8NHS0 232 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 SMPDL3BQ92485 455 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ZNF778Q96MU6 729 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 IL21RQ9HBE5 538 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 POPDC3Q9HBV1 291 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 RASSF1Q9NS23 344 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 MARCH4Q9P2E8 410 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 FADS3Q9Y5Q0 445 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 SEMA4FO95754 770 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 GPIP06744 558 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ADRB3P13945 408 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 NELFEP18615 380 aaKnown RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 OXTRP30559 389 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 GSCP56915 257 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ARL10Q8N8L6 244 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 SCRN2Q96FV2 425 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 TBL1XR1Q9BZK7 514 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 LMAN1LQ9HAT1 526 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ACTL7AQ9Y615 435 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 OR5K4A6NMS3 321 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 STX16-NPEPL1H3BU86 382 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 STX16O14662 325 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 SPINT3P49223 89 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ARSDP51689 593 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 FAM26DQ5JW98 314 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 TRIQKQ629K1 86 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 ADGRG6Q86SQ4 1221 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 JAZF1Q86VZ6 243 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 KLF16Q9BXK1 252 aaPredicted RBP14.61□□□□□ -0.07
C9orf47-201ENST00000334490 PHF11Q9UIL8 331 aa14.61□□□□□ -0.07
C9orf47-201ENST00000334490 CLIC1O00299 241 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 JMJD7P0C870 316 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 AGTR2P50052 363 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 CLCN7P51798 805 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 FOLH1Q04609 750 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 KRR1Q13601 381 aaKnown RBP14.6□□□□□ -0.07
C9orf47-201ENST00000334490 DGUOKQ16854 277 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 SPANXN2Q5MJ10 180 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 NATD1Q8N6N6 113 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 SLC35A5Q9BS91 424 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 SPATA7Q9P0W8 599 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 TP73O15350 636 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 S1PR4O95977 384 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 GIMD1P0DJR0 217 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 CCR10P46092 362 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 DSC3Q14574 896 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 TMEM135Q86UB9 458 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 PIGXQ8TBF5 258 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 PRORSD1PA6NEY8 169 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 CENPXA8MT69 81 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 SERPINA1P01009 418 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 ALPPP05187 535 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 DRD1P21728 446 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 DUSP3P51452 185 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-201ENST00000334490 SLC18A1P54219 525 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 ERVFC1P60507 584 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 DLG1Q12959 904 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 FAM47BQ8NA70 645 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 FOXJ1Q92949 421 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 TSACCQ96A04 125 aaPredicted RBP14.6□□□□□ -0.07
C9orf47-201ENST00000334490 COL21A1Q96P44 957 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 KCNA7Q96RP8 456 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 REXO4Q9GZR2 422 aaKnown RBP14.6□□□□□ -0.07
C9orf47-201ENST00000334490 CSNK1G1Q9HCP0 422 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 MOCS1Q9NZB8 636 aa14.6□□□□□ -0.07
C9orf47-201ENST00000334490 NME6O75414 186 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 CDK9P50750 372 aaKnown RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 MED22Q15528 200 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ZDHHC21Q8IVQ6 265 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ZDHHC14Q8IZN3 488 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 PNPLA3Q9NST1 481 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 IKZF2Q9UKS7 526 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 C2orf74A8MZ97 194 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 PEX12O00623 359 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ZNF217O75362 1048 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 BPIP17213 487 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ATP5A1P25705 553 aaKnown RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 TTKP33981 857 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 DSC1Q08554 894 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 KCNC3Q14003 757 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 PCBP2Q15366 365 aaKnown RBP eCLIP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 GPR68Q15743 365 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms