RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 B3GAT3O94766 335 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CHRNA1P02708 482 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 KELP23276 732 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 SPP2Q13103 211 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 LSAMPQ13449 338 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CEP97Q8IW35 865 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 COQ8AQ8NI60 647 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF675Q8TD23 568 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 HIST1H2AAQ96QV6 131 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 CGREF1Q99674 301 aa5.4□□□□□ -1.54
PTPRB-202ENST00000334414 STMND1H3BQB6 276 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SLC7A4O43246 635 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 HTRA2O43464 458 aaPredicted RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 LATO43561 262 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SLC16A8O95907 504 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SCNN1AP37088 669 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SSR2P43308 183 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TLE2Q04725 743 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SEMA5AQ13591 1074 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TBC1D25Q3MII6 688 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ARL13AQ5H913 290 aaPredicted RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ABHD13Q7L211 337 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 PHYKPLQ8IUZ5 450 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 POP1Q99575 1024 aaKnown RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 CEP41Q9BYV8 373 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ENAMQ9NRM1 1142 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ARHGEF15O94989 841 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 PCDH8O95206 1070 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 BPNT1O95861 308 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SLC2A5P22732 501 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ARSHQ5FYA8 562 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 AKR1C8PQ5T2L2 129 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 HGSNATQ68CP4 663 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF529Q6P280 563 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 IRF2BP2Q7Z5L9 587 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF584Q8IVC4 421 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 LIX1Q8N485 282 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SLC35G5Q96KT7 338 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TAPBPLQ9BX59 468 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 IQCMA0A1B0GVH7 501 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TSPAN15O95858 294 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 UBA1P22314 1058 aaKnown RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 CAP2P40123 477 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 NSG1P42857 185 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 RPP30P78346 268 aaKnown RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 IL23RQ5VWK5 629 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TIFABQ6ZNK6 161 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 NUP54Q7Z3B4 507 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF599Q96NL3 588 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TRIB3Q96RU7 358 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ANKRD60Q9BZ19 345 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 RFPL3O75679 317 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SC5DO75845 299 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 ATP5A1P25705 553 aaKnown RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 SELPLGQ14242 412 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 FAM43BQ6ZT52 329 aaPredicted RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 PRSS48Q7RTY5 328 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 TRAPPC5Q8IUR0 188 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 DNAJC22Q8N4W6 341 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 PLD4Q96BZ4 506 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 CELF6Q96J87 481 aaKnown RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 B3GNT4Q9C0J1 378 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 MKRN2Q9H000 416 aaKnown RBP5.4□□□□□ -1.55
PTPRB-202ENST00000334414 CDT1Q9H211 546 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 KLHL21Q9UJP4 597 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 U3KQV3 271 aa5.4□□□□□ -1.55
PTPRB-202ENST00000334414 CLDN4O14493 209 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 EEDO75530 441 aaKnown RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 HSD3B1P14060 373 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 EDNRAP25101 427 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 RPS5P46782 204 aaKnown RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 MCCD1P59942 119 aaPredicted RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 NFKB2Q00653 900 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CAMK2DQ13557 499 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 PRPF38BQ5VTL8 546 aaKnown RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 MAP1SQ66K74 1059 aaPredicted RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 SLC30A6Q6NXT4 461 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CDC42EP5Q6NZY7 148 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 IDO2Q6ZQW0 420 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 HEPHQ9BQS7 1158 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 FAM105AQ9NUU6 356 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 HCAR3P49019 387 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 BACE1P56817 501 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 GRIK2Q13002 908 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 SLC1A5Q15758 541 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CERCAMQ5T4B2 595 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 TFAP2DQ7Z6R9 452 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CYP2W1Q8TAV3 490 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 DENND1AQ8TEH3 1009 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CELF1Q92879 486 aaKnown RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 PEX13Q92968 403 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 PYURFQ96I23 114 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF317Q96PQ6 595 aaPredicted RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 WACQ9BTA9 647 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.39□□□□□ -1.55
PTPRB-202ENST00000334414 AGPSO00116 658 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 NCK1P16333 377 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 VEGFCP49767 419 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CAV3P56539 151 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms