RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 EQTNQ9NQ60 294 aa13.16□□□□□ -0.3
RIPK4-201ENST00000332512 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 HNRNPCL2B2RXH8 293 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TARM1B6A8C7 271 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 IFNA14P01570 189 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 FGF4P08620 206 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 DDX5P17844 614 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 CRHBPP24387 322 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 BUD31P41223 144 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 HSPB3Q12988 150 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TSTQ16762 297 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ZNF404Q494X3 552 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 BTLAQ7Z6A9 289 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 HMGCLL1Q8TB92 370 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TRUB1Q8WWH5 349 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 MTMR11A4FU01 709 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ANKRD33BA6NCL7 494 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 OR6C75A6NL08 312 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 H0YAE9 185 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 STX16O14662 325 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 IFI30P13284 250 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TACR1P25103 407 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 EMX1Q04741 257 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ADGRF1Q5T601 910 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 FRG2Q64ET8 278 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ARMC8Q8IUR7 673 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 CHDHQ8NE62 594 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 SOCS4Q8WXH5 440 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ISL2Q96A47 359 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 FRG2BQ96QU4 278 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ZBTB20Q9HC78 741 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 A6NL46 340 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 GGT1P19440 569 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 DNAJA1P31689 397 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 HJURPQ8NCD3 748 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 GLB1L3Q8NCI6 653 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 CLP1Q92989 425 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 EXOSC8Q96B26 276 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 SH3YL1Q96HL8 342 aaPredicted RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 RHNO1Q9BSD3 238 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 NLNQ9BYT8 704 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 OR51B5Q9H339 312 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TRPV5Q9NQA5 729 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 DLGAP4Q9Y2H0 992 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 PCDHA9Q9Y5H5 950 aa13.15□□□□□ -0.3
RIPK4-201ENST00000332512 CFAP20Q9Y6A4 193 aaKnown RBP13.15□□□□□ -0.3
RIPK4-201ENST00000332512 MATN4O95460 622 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 MANFP55145 182 aaKnown RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 CD83Q01151 205 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 KRR1Q13601 381 aaKnown RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 BTG3Q14201 252 aaPredicted RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 OMA1Q96E52 524 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 CD244Q9BZW8 370 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 ABCB8Q9NUT2 735 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 GPR83Q9NYM4 423 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 COMMD3Q9UBI1 195 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 POU2F3Q9UKI9 436 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 ASF1AQ9Y294 204 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 DHRS7Q9Y394 339 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 GSAPA4D1B5 854 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 C2orf78A6NCI8 922 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 DNAJB1P25685 340 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 IL12RB1P42701 662 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 ZSWIM7Q19AV6 140 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 TIMM50Q3ZCQ8 353 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 SUSD1Q6UWL2 747 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 DCP2Q8IU60 420 aaKnown RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 RNFT2Q96EX2 444 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 COQ7Q99807 217 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 MCMBPQ9BTE3 642 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 CCDC182A6NF36 153 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 NR2F1P10589 423 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 CKBP12277 381 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 HRH2P25021 359 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 FEN1P39748 380 aaKnown RBP13.14□□□□□ -0.31
RIPK4-201ENST00000332512 UGT3A2Q3SY77 523 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 RAB41Q5JT25 222 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 CACTIN-AS1Q8N1I8 211 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 DEPDC4Q8N2C3 294 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 APIPQ96GX9 242 aa13.14□□□□□ -0.31
RIPK4-201ENST00000332512 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms