RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 MLYCDO95822 493 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 ZNF806P0C7X5 589 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 EPHA8P29322 1005 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PDHA2P29803 388 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PBLDP30039 288 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 SHMT2P34897 504 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PEX19P40855 299 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PREPP48147 710 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 NUDT2P50583 147 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 NAGLUP54802 743 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 UBE2IP63279 158 aaKnown RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 ANKS6Q68DC2 871 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 KLHL35Q6PF15 583 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 KANSL1Q7Z3B3 1105 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 SNX32Q86XE0 403 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 WDR55Q9H6Y2 383 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 DNAAF2Q9NVR5 837 aaKnown RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 OR6C2Q9NZP2 312 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 CD274Q9NZQ7 290 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 VTI1BQ9UEU0 232 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 TBC1D29Q9UFV1 150 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PRPF19Q9UMS4 504 aaKnown RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 ASF1AQ9Y294 204 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PCYT1BQ9Y5K3 369 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-201ENST00000331239 ENTPD2Q9Y5L3 495 aa9.21□□□□□ -0.94
C11orf54-201ENST00000331239 PI4KAP42356 2102 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 LILRA5A6NI73 299 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PDZK1P1A8MUH7 402 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ARHGEF33A8MVX0 844 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 KATNA1O75449 491 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 UBTFL6P0CB48 400 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 THRAP10827 490 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PCSK2P16519 638 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 EPHA3P29320 983 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 MPLP40238 635 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 GPR3P46089 330 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 CCR10P46092 362 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SLC6A12P48065 614 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PGGT1BP53609 377 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 BNC1Q01954 994 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 RELAQ04206 551 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ABRQ12979 859 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 GRIK2Q13002 908 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 NR1D2Q14995 579 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 LSM12Q3MHD2 195 aaKnown RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 C6orf132Q5T0Z8 1188 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 C16orf89Q6UX73 402 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 DBX2Q6ZNG2 339 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PRR23BQ6ZRT6 265 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 RNF165Q6ZSG1 346 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PDSS2Q86YH6 399 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SUMF1Q8NBK3 374 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 HIPK4Q8NE63 616 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 OR2L8Q8NGY9 312 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 OR56A3Q8NH54 315 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SLC22A18Q96BI1 424 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PPP1R36Q96LQ0 422 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 C12orf66Q96MD2 445 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 DPYSL5Q9BPU6 564 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 HAUS8Q9BT25 410 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 NUF2Q9BZD4 464 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 CD244Q9BZW8 370 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 EHD1Q9H4M9 534 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ACSS2Q9NR19 701 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 TMEM74BQ9NUR3 256 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ARL15Q9NXU5 204 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PDP2Q9P2J9 529 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 KLF15Q9UIH9 416 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PNMA8BQ9ULN7 279 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 KCNK6Q9Y257 313 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SNX11Q9Y5W9 270 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 FAM86C2PA6NEL3 165 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 A8MT66 165 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SUPT3HB4E1H0 165 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SUPT3HO75486 399 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 CCNDBP1O95273 360 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 LYNP07948 512 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 RPS17P08708 135 aaKnown RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 GFAPP14136 432 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PEX2P28328 305 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 RAB28P51157 221 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PNLIPRP1P54315 467 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PKNOX1P55347 436 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ABATP80404 500 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SRSF5Q13243 272 aaKnown RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SQSTM1Q13501 440 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 E2F2Q14209 437 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 HLA-BQ31612 363 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 RNF111Q6ZNA4 994 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 RD3Q7Z3Z2 195 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ZNF438Q7Z4V0 828 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 GPR156Q8NFN8 814 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SAP25Q8TEE9 199 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 ZDHHC1Q8WTX9 485 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SKA2Q8WVK7 121 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-201ENST00000331239 SMPDL3AQ92484 453 aa9.2□□□□□ -0.94
C11orf54-201ENST00000331239 CXorf40BQ96DE9 158 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms