RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 ANKRD13BQ86YJ7 626 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 CYP4X1Q8N118 509 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 Q8N402 240 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 ELP5Q8TE02 316 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 TREX2Q9BQ50 279 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-201ENST00000328333 RASAL1O95294 804 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 FPR1P21462 350 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 PROZP22891 400 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 CD40LGP29965 261 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 RAB5CP51148 216 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 CAV3P56539 151 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 YBEYP58557 167 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-201ENST00000328333 PLEKHG7Q6ZR37 379 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 C12orf40Q86WS4 652 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 HAVCR2Q8TDQ0 301 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 ULBP1Q9BZM6 244 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 PHPT1Q9NRX4 125 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-201ENST00000328333 CFAP97Q9P2B7 532 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 CNOT11Q9UKZ1 510 aaKnown RBP13.97□□□□□ -0.17
COL7A1-201ENST00000328333 DUSP4Q13115 394 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 KIAA0930Q6ICG6 404 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-201ENST00000328333 GPR135Q8IZ08 494 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 NKD1Q969G9 470 aa13.97□□□□□ -0.17
COL7A1-201ENST00000328333 NT5C1B-RDH14C9J2C7 533 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PPM1AP35813 382 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PBX3P40426 434 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 JAM2P57087 298 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 SLC36A4Q6YBV0 504 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 ZSCAN1Q8NBB4 408 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 NTSR2O95665 410 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 ARL11Q969Q4 196 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 AZIN2Q96A70 460 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 TXN2Q99757 166 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 SULT4A1Q9BR01 284 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 SMURF1Q9HCE7 757 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 TBC1D14Q9P2M4 693 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 KIF26BQ2KJY2 2108 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 AMHP03971 560 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 CAPN3P20807 821 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 RPL10P27635 214 aaKnown RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 SLC3A1Q07837 685 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 C3P1Q6ZMU1 363 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 GPAT4Q86UL3 456 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 C7orf61Q8IZ16 206 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 LNX1Q8TBB1 728 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PNPLA2Q96AD5 504 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 ASPNQ9BXN1 380 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 WDR55Q9H6Y2 383 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 KIAA1522Q9P206 1035 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 STUB1Q9UNE7 303 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PCDHB9Q9Y5E1 797 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 TRIP12Q14669 1992 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 MRPS14O60783 128 aaKnown RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 OR2B3O76000 313 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 VARSP26640 1264 aaKnown RBP13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PBX1P40424 430 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 GLP1RP43220 463 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 SEMA5AQ13591 1074 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 CD180Q99467 661 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 WACQ9BTA9 647 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 MRI1Q9BV20 369 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PRRG4Q9BZD6 226 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 PACSIN3Q9UKS6 424 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 JCADQ9P266 1359 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 FAM149AA5PLN7 773 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 TOR1BO14657 336 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 CRYZL1O95825 349 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 BMP6P22004 513 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 RHDQ02161 417 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 TMEM199Q8N511 208 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 ZUFSPQ96AP4 578 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 OR10A4Q9H209 315 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 CEP250Q9BV73 2442 aa13.96□□□□□ -0.17
COL7A1-201ENST00000328333 B4GALT4O60513 344 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 HSD11B1P28845 292 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 HERV-K104P61576 105 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 LCLAT1Q6UWP7 414 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 BRSK1Q8TDC3 778 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 CSPG4P5Q96PW8 444 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 DUSP26Q9BV47 211 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 TFB2MQ9H5Q4 396 aaKnown RBP13.96□□□□□ -0.18
COL7A1-201ENST00000328333 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 TRIM64A6NGJ6 449 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 PIGGQ5H8A4 983 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 BTF3L4Q96K17 158 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 ERVW-1Q9UQF0 538 aa13.96□□□□□ -0.18
COL7A1-201ENST00000328333 A0A1W2PP18 115 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 GXYLT2A0PJZ3 443 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 TREHO43280 583 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 TSPAN1O60635 241 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 GTF2F2P13984 249 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 ABCG1P45844 678 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 PSMA6P60900 246 aaKnown RBP13.95□□□□□ -0.18
COL7A1-201ENST00000328333 TLE2Q04725 743 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 C7orf57Q8NEG2 295 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 PROKR2Q8NFJ6 384 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 METTL21AQ8WXB1 218 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 ASB4Q9Y574 426 aa13.95□□□□□ -0.18
COL7A1-201ENST00000328333 NKX6-1P78426 367 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-201ENST00000328333 NFKB2Q00653 900 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms