RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PRKG2Q13237 762 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 CCSMST1Q4G0I0 132 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 PRRT3Q5FWE3 981 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 PAGE2BQ5JRK9 111 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 THEMIS2Q5TEJ8 643 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 ATG14Q6ZNE5 492 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 RPS27LQ71UM5 84 aaKnown RBP17.44■□□□□ 0.38
SYNE4-201ENST00000324444 SLC9B2Q86UD5 537 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 NRROSQ86YC3 692 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 L3MBTL4Q8NA19 623 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 OR2L8Q8NGY9 312 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 ACTRT2Q8TDY3 377 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 TWIST2Q8WVJ9 160 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 SLC22A18Q96BI1 424 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 REPS1Q96D71 796 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 TUBB6Q9BUF5 446 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 NUF2Q9BZD4 464 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 TCF7L2Q9NQB0 619 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 INTS7Q9NVH2 962 aaKnown RBP17.44■□□□□ 0.38
SYNE4-201ENST00000324444 OR6C2Q9NZP2 312 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 HEY2Q9UBP5 337 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 ASB1Q9Y576 335 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 TMEM131Q92545 1883 aa17.44■□□□□ 0.38
SYNE4-201ENST00000324444 FAM221BA6H8Z2 402 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CCNDBP1O95273 360 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 VIPP01282 170 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CD59P13987 128 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CXCR2P25025 360 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CASP2P42575 452 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CSNK1EP49674 416 aaKnown RBP17.43■□□□□ 0.38
SYNE4-201ENST00000324444 ERVPABLB-1P60509 514 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 TBPL1P62380 186 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 SHC2P98077 582 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 BNC1Q01954 994 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 FOXC1Q12948 553 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 SLC14A1Q13336 389 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 GRB7Q14451 532 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 PDCD2Q16342 344 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-201ENST00000324444 HIST2H2ACQ16777 129 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-201ENST00000324444 PRAMEF14Q5SWL7 426 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 PRAMEF13Q5VWM6 474 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 HIST2H2AA3Q6FI13 130 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-201ENST00000324444 TRPM8Q7Z2W7 1104 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 OR52B6Q8NGF0 335 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 UBE2E3Q969T4 207 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 PYCR2Q96C36 320 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 C19orf60Q96EN9 201 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 MAELQ96JY0 434 aaKnown RBP17.43■□□□□ 0.38
SYNE4-201ENST00000324444 EFCAB11Q9BUY7 163 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 KLF15Q9UIH9 416 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 FIS1Q9Y3D6 152 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 DNAJC15Q9Y5T4 150 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 ST14Q9Y5Y6 855 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CFAP20Q9Y6A4 193 aaKnown RBP17.43■□□□□ 0.38
SYNE4-201ENST00000324444 CSNK1G3Q9Y6M4 447 aa17.43■□□□□ 0.38
SYNE4-201ENST00000324444 SPAARA0A1B0GVQ0 90 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 CCT8L1PA6NM43 557 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 OR52A4PA6NMU1 304 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 SLC28A1O00337 649 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 YKT6O15498 198 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 ULK1O75385 1050 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 CAPN1P07384 714 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 SERPINA6P08185 405 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 HRH2P25021 359 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 PKLRP30613 574 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 ARRB1P49407 418 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-201ENST00000324444 ABATP80404 500 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 BTKQ06187 659 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 UGT3A2Q3SY77 523 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 XKR6Q5GH73 641 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 CLEC6AQ6EIG7 209 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 LRRC56Q8IYG6 542 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-201ENST00000324444 CDYL2Q8N8U2 506 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 OR52E1Q8NGJ3 308 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 PTCD3Q96EY7 689 aaKnown RBP17.42■□□□□ 0.38
SYNE4-201ENST00000324444 LRRC61Q9BV99 259 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 PITHD1Q9GZP4 211 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-201ENST00000324444 IL21RQ9HBE5 538 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 PCDHB11Q9Y5F2 797 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 PCDHGA11Q9Y5H2 935 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 CACNA1BQ00975 2339 aa17.42■□□□□ 0.38
SYNE4-201ENST00000324444 A0A1B0GVT2 93 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 PPP6CO00743 305 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 AQP9O43315 295 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 KIAA0754O94854 1291 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 ANXA6P08133 673 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 JUPP14923 745 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 NPPBP16860 134 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 ADSLP30566 484 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-201ENST00000324444 SIM1P81133 766 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-201ENST00000324444 SF3A3Q12874 501 aaKnown RBP eCLIP17.41■□□□□ 0.38
SYNE4-201ENST00000324444 CHIT1Q13231 466 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 NAA25Q14CX7 972 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 LETMD1Q6P1Q0 360 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 C17orf64Q86WR6 236 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 MYLK4Q86YV6 388 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-201ENST00000324444 PARP9Q8IXQ6 854 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 DDIASQ8IXT1 998 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 FAM46DQ8NEK8 389 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms