RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PTPN9P43378 593 aa9.52□□□□□ -0.88
COL12A1-201ENST00000322507 PLK1P53350 603 aa9.52□□□□□ -0.88
COL12A1-201ENST00000322507 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.88
COL12A1-201ENST00000322507 C1GALT1C1Q96EU7 318 aa9.52□□□□□ -0.88
COL12A1-201ENST00000322507 CENPNQ96H22 339 aaPredicted RBP9.52□□□□□ -0.88
COL12A1-201ENST00000322507 ZDHHC6Q9H6R6 413 aa9.52□□□□□ -0.88
COL12A1-201ENST00000322507 POLLQ9UGP5 575 aa9.52□□□□□ -0.88
COL12A1-201ENST00000322507 PPIEQ9UNP9 301 aaKnown RBP9.52□□□□□ -0.88
COL12A1-201ENST00000322507 ZSCAN5DPP0CG00 497 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 DPP6P42658 865 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CTSKP43235 329 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 SLC18A1P54219 525 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 HSPA14Q0VDF9 509 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 PNMA5Q96PV4 448 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 DUSP9Q99956 384 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CNPPD1Q9BV87 410 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 NDOR1Q9UHB4 597 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 PRPS2P11908 318 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 BDNFP23560 247 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 BEND4Q6ZU67 534 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 JAZF1Q86VZ6 243 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 TMEM199Q8N511 208 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 OR4A15Q8NGL6 344 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 TLX3O43711 291 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CDK18Q07002 472 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 STK11Q15831 433 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 TMEM27Q9HBJ8 222 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 AGO1Q9UL18 857 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 MEGF6O75095 1541 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 PDHXO00330 501 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 MAGEB4O15481 346 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 KCNQ2O43526 872 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 RFPL1O75677 317 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 AMD1P17707 334 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 RPL38P63173 70 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 LCP2Q13094 533 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 RABL3Q5HYI8 236 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 TOMM5Q8N4H5 51 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ACER1Q8TDN7 264 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 C10orf90Q96M02 699 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ELL3Q9HB65 397 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 NR2E3Q9Y5X4 410 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 SLC15A5A6NIM6 579 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 TTLL8A6PVC2 850 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CSTF1Q05048 431 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 CACNG1Q06432 222 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 C11orf65Q8NCR3 313 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 DDX1Q92499 740 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 NKD2Q969F2 451 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 FAM96BQ9Y3D0 163 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 PCDHGB2Q9Y5G2 931 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 DNAJB5O75953 348 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 PDYNP01213 254 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 C8GP07360 202 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 HEPACAMQ14CZ8 416 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 SPESP1Q6UW49 350 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 OR2L8Q8NGY9 312 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 SPPL2BQ8TCT7 592 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 POTEKPQ9BYX7 375 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 TCEAL2Q9H3H9 227 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 SOHLH2Q9NX45 425 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF208O43345 1280 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 PTTG1O95997 202 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF311Q5JNZ3 666 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 MTFR2Q6P444 385 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 SERPINA13PQ6UXR4 307 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 LRRC55Q6ZSA7 311 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 LINGO2Q7L985 606 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 AMIGO2Q86SJ2 522 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ADGRE2Q9UHX3 823 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 FBXO5Q9UKT4 447 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 ERVW-1Q9UQF0 538 aa9.52□□□□□ -0.89
COL12A1-201ENST00000322507 GPR89AB7ZAQ6 455 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 STK16O75716 305 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 GPR89BP0CG08 455 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 JUPP14923 745 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 CPEP16870 476 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 FAM117BQ6P1L5 589 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 NLRP8Q86W28 1048 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 KDM1BQ8NB78 822 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 COL26A1Q96A83 441 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 AURKBQ96GD4 344 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-201ENST00000322507 PHOX2BQ99453 314 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 SEMA3CQ99985 751 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 COMMD4Q9H0A8 199 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 FN3KRPQ9HA64 309 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 KCNIP2Q9NS61 270 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 POLHQ9Y253 713 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 BCL9O00512 1426 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 RPP40O75818 363 aaKnown RBP9.51□□□□□ -0.89
COL12A1-201ENST00000322507 BPGMP07738 259 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 USP30Q70CQ3 517 aa9.51□□□□□ -0.89
COL12A1-201ENST00000322507 S100A14Q9HCY8 104 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms